| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gluP [H]
Identifier: 238027400
GI number: 238027400
Start: 1972592
End: 1973839
Strand: Reverse
Name: gluP [H]
Synonym: bglu_1g17960
Alternate gene names: 238027400
Gene position: 1973839-1972592 (Counterclockwise)
Preceding gene: 238027401
Following gene: 238027399
Centisome position: 50.53
GC content: 69.47
Gene sequence:
>1248_bases ATGCAACAGGTATCGAGGGCCGGCGCGGCGCCGGCCGGCACGACCGAACGCAGGCGCGACTGGCGCACCGCGTTGCTGCT GGTGACGAGCCTCTTTTTCATGTGGGGCCTGTCGTATGGGCTGCTCGACGTGCTCAACAAGCATTTCCAGGACGTGCTGC ATGTCAGCAAGGCGGAGTCCGGCCTGCTGCAGGGCGCCTATTTCGGCGCCTACTTCGTGATGGCGATACCGGCCGCGCTG CTGATGGAGCGCTTCGGCTACAAGCGCGGCATCCTGCTCGGCCTCACGCTCTACGCGATCGGCGCGCTGCTGTTCATTCC GGCCTCGGCGGCGGCGAGCTTTCCGTTCTTCCTGTTCGCGCTGTTCGTGATCGCCGCCGGGCTGGGCTGCCTCGAGACCG CCGCGAACCCCTACGTGACCGAACTCGGCGCGCCCGAGACCGCCGAGCGCCGGCTCAACCTCTCGCAGTCGTTCAACGGG CTGGGCAGCTTCCTCGGGCCGCTGATCGGCGGCGCGTTCTTCTTCCAGGCGGCTTCGCCGGGCGAGAGCGCCGAGGCCGG GCTCGGTTCGGTACGGGTGACCTACGTGGTGATCGCGGTGGTGGTGGTATTGCTCGCGCTGCTGATCGCGCGCACCCCGA TGCCCGACATCCGCCAAGCCGCCTCGCCCGCGCAGCGCGCGGCCGGCGCCTCGCTCTGGTCGCGCCCGCACTTCGTCGGC GGGATCGCCGCGCAGTTCTTCTACGTGGCCGCGCAGGTGGGCGTGGGCGCGTTCTTCATCAACTATGCGATCGTCCACTG GCCGGCGCTGAGCGCCCAGCGCGCCTCGTTCCTGCTGTCGGTGGCGCTGTTGCTGTTCATGGCCGGGCGCTTCGTCAGCA CCGCGCTGATGGGGCGAATCTCGCCCGCCGCGCTGCTGAGCGTCTACGCACTCGCCAACGTGGCGCTGAGCGCGGTGGTG CTGGCCGGCATCCCGGTGGTCTCGGTGCTGGCGCTGATCGCCATGTTCTTCTTCATGTCGATCATGTTTCCGACCATCTT CGCGCTCGGCGTGAAGGACCTCGGGCCGCAGACCAAGCGCGGGGCGTCGTACCAGGTGATGTCGGTCGTCGGCGGCGCGA TCATGCCGTATGCGATGGGACGCGTGGCCGACGGCGCGGGGGTGGGCGCGGCCTATCTGCTGCCGCTCCTGTGCTTCGCG ATCGTGGCGTGGTACGGCTGGCGCGGCAGCCGCGTGGCCGGCGCGTGA
Upstream 100 bases:
>100_bases ATGGTGCGCATCTTCGATCTCGCGCAGCAGTGACGCGGCGCGCCGCGCGCGCGGCCGGCACGGCAATCGACCGGAACGGA TCAGCAAGGAGACAGGCAAC
Downstream 100 bases:
>100_bases GCCGCGCGGCGGCAGGCTGCCGGGCGCGCTCGGCAGCCTGCGCCAACAGGTTAGAATCGCCGTCCGGTTCACGTTCGCCC GCCCGGCCGGCGGCGGGCGG
Product: L-fucose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA IVAWYGWRGSRVAGA
Sequences:
>Translated_415_residues MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA IVAWYGWRGSRVAGA >Mature_415_residues MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAESGLLQGAYFGAYFVMAIPAAL LMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFALFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNG LGSFLGPLIGGAFFFQAASPGESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRISPAALLSVYALANVALSAVV LAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKRGASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFA IVAWYGWRGSRVAGA
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=421, Percent_Identity=37.7672209026128, Blast_Score=258, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43748; Mature: 43748
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAES CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLQGAYFGAYFVMAIPAALLMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNGLGSFLGPLIGGAFFFQAASP HHHHHHCCHHHHHCCCCCHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC GESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCHHHHCCCCHHH GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAALLSVYALANVALSAVVLAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKR CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFAIVAWYGWRGSRVAGA CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQQVSRAGAAPAGTTERRRDWRTALLLVTSLFFMWGLSYGLLDVLNKHFQDVLHVSKAES CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLQGAYFGAYFVMAIPAALLMERFGYKRGILLGLTLYAIGALLFIPASAAASFPFFLFA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LFVIAAGLGCLETAANPYVTELGAPETAERRLNLSQSFNGLGSFLGPLIGGAFFFQAASP HHHHHHCCHHHHHCCCCCHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC GESAEAGLGSVRVTYVVIAVVVVLLALLIARTPMPDIRQAASPAQRAAGASLWSRPHFVG CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCHHHHCCCCHHH GIAAQFFYVAAQVGVGAFFINYAIVHWPALSAQRASFLLSVALLLFMAGRFVSTALMGRI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAALLSVYALANVALSAVVLAGIPVVSVLALIAMFFFMSIMFPTIFALGVKDLGPQTKR CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GASYQVMSVVGGAIMPYAMGRVADGAGVGAAYLLPLLCFAIVAWYGWRGSRVAGA CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]