| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027380
Identifier: 238027380
GI number: 238027380
Start: 1948326
End: 1949537
Strand: Reverse
Name: 238027380
Synonym: bglu_1g17750
Alternate gene names: NA
Gene position: 1949537-1948326 (Counterclockwise)
Preceding gene: 238027381
Following gene: 238027378
Centisome position: 49.9
GC content: 76.32
Gene sequence:
>1212_bases ATGGCGGGTGCCGCCCGGCAGGGCGGTGCGCCGGCAGGTCCTGCGCGGCAGCGGCATTGTAGTTTTTTCCGTCAACGGAA AGTCCCGCACCGGGCCGGCGCGCGGCGCAAGCCCGGCCGGCCCGTGCCGCTCGTCGCCGTCGCACGCGCATCCCAGACAA CGGAGTCAGCCATGTTCATCAACCAGTGGTTCTTGCGGCGCGCGCTGGCGATGGCCTGCGTGCGACCGATCGGCAGCGCG GACCCGACCGGCCGCCCGCAGGTGATCGCCCATCTGGCCGCGCAAGCCGGCCATGCCCGGCGCCTGCTCGTGACCGGGCT CGACGGCGACCGCGTCAGCGTGCTCGGCGGCGAGGCGGCGCCGGCAGCGACGACGCTCGCCGGACTTGGGCGGCAGCAGC TGAGCTACGTCGTCTACCTGCGCCGCTACATGTTTCACGAGCGCGAGGCCTGGCGCGTGGTGCTGGGCGTGCGGCTGCAC GGCTACCGGCTCGCGGCATGGCTGGGCGACCTGCGCATGCGCGGCTTCTGGCACGCCAACGCCCCGCGCGCGGCGCGCAT GGAGGTACTCGGGCGGATCGCGGCGCTGTCGGCCGAACTGTCGTCGCAGGTGGCGCCGGCCGCGCTGCTGGCGCTGGCCG ACTGGCCGCAGGTGCCGCGCGACGCCGCGGTGGACGAGCGGCGCCGCTGCCTGGAGCGCATCACGGCCACGCTGGTCGCG GCCGGCTACGTGCGCAAGACGGCCGCGGGCGGCTTCGCATTGAGCCCGCGCGGGCACGCGGCGCTCGAACGCTACGATGC CGACCTGCGGCGCCATTGCCGTCAGTCCGCGCTGCGCCACGCGCTGAACGCGCTGGTAGTGGTGGCCGGGATCGCCGCGC TGGAGGCGGGCGGCACGATCCACGCACCGTCCCGGCCGGCCGACGACGGGCTCGACACGCCGCACTCGTGCGCGCCGGCC GATGCTGACGGCAGCGACGGCAGCGGCTGCGGCCGCTTCTTCAGCGAGGGGCCGTCGGCGATCGCGCCGGCGCCGTTCAG GCTCGACACCGTGCATCGCCCGGTGCCCTCCGCCGGCATCGAGCCGTCCGGCGCGCGGCGTCACGGCGCGCACAAGGGCG CGCGCCCGGGCGCGGTCTGGCCGCGCGTGGCGCCGTCCGGCGCTGCGGGCACGGGCGGCCATCGGCTCGCGGCGGGGCAG CAGAGCGCCTGA
Upstream 100 bases:
>100_bases GCCGCATTCCCTCCGCGCGCGGCCAGGCCCGTTGCGCATGGCTCGCTTCTTGCTGCTACCCGACGCGCGAATCCGCTGCG CATCGCTGACTTGCCCGAGG
Downstream 100 bases:
>100_bases CGGGCCGCGCGCGGCTCGCTGTCATTCAGCCGGCATGCCGGTTGGCTGGGCGTGGGGGCCGCCGCCGTGGGGCGGACGGG ACGTGGCGGGTGGGGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAGAARQGGAPAGPARQRHCSFFRQRKVPHRAGARRKPGRPVPLVAVARASQTTESAMFINQWFLRRALAMACVRPIGSA DPTGRPQVIAHLAAQAGHARRLLVTGLDGDRVSVLGGEAAPAATTLAGLGRQQLSYVVYLRRYMFHEREAWRVVLGVRLH GYRLAAWLGDLRMRGFWHANAPRAARMEVLGRIAALSAELSSQVAPAALLALADWPQVPRDAAVDERRRCLERITATLVA AGYVRKTAAGGFALSPRGHAALERYDADLRRHCRQSALRHALNALVVVAGIAALEAGGTIHAPSRPADDGLDTPHSCAPA DADGSDGSGCGRFFSEGPSAIAPAPFRLDTVHRPVPSAGIEPSGARRHGAHKGARPGAVWPRVAPSGAAGTGGHRLAAGQ QSA
Sequences:
>Translated_403_residues MAGAARQGGAPAGPARQRHCSFFRQRKVPHRAGARRKPGRPVPLVAVARASQTTESAMFINQWFLRRALAMACVRPIGSA DPTGRPQVIAHLAAQAGHARRLLVTGLDGDRVSVLGGEAAPAATTLAGLGRQQLSYVVYLRRYMFHEREAWRVVLGVRLH GYRLAAWLGDLRMRGFWHANAPRAARMEVLGRIAALSAELSSQVAPAALLALADWPQVPRDAAVDERRRCLERITATLVA AGYVRKTAAGGFALSPRGHAALERYDADLRRHCRQSALRHALNALVVVAGIAALEAGGTIHAPSRPADDGLDTPHSCAPA DADGSDGSGCGRFFSEGPSAIAPAPFRLDTVHRPVPSAGIEPSGARRHGAHKGARPGAVWPRVAPSGAAGTGGHRLAAGQ QSA >Mature_402_residues AGAARQGGAPAGPARQRHCSFFRQRKVPHRAGARRKPGRPVPLVAVARASQTTESAMFINQWFLRRALAMACVRPIGSAD PTGRPQVIAHLAAQAGHARRLLVTGLDGDRVSVLGGEAAPAATTLAGLGRQQLSYVVYLRRYMFHEREAWRVVLGVRLHG YRLAAWLGDLRMRGFWHANAPRAARMEVLGRIAALSAELSSQVAPAALLALADWPQVPRDAAVDERRRCLERITATLVAA GYVRKTAAGGFALSPRGHAALERYDADLRRHCRQSALRHALNALVVVAGIAALEAGGTIHAPSRPADDGLDTPHSCAPAD ADGSDGSGCGRFFSEGPSAIAPAPFRLDTVHRPVPSAGIEPSGARRHGAHKGARPGAVWPRVAPSGAAGTGGHRLAAGQQ SA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42551; Mature: 42420
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAARQGGAPAGPARQRHCSFFRQRKVPHRAGARRKPGRPVPLVAVARASQTTESAMFI CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEHHCCCHHHHHHHH NQWFLRRALAMACVRPIGSADPTGRPQVIAHLAAQAGHARRLLVTGLDGDRVSVLGGEAA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCC PAATTLAGLGRQQLSYVVYLRRYMFHEREAWRVVLGVRLHGYRLAAWLGDLRMRGFWHAN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCEECCC APRAARMEVLGRIAALSAELSSQVAPAALLALADWPQVPRDAAVDERRRCLERITATLVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AGYVRKTAAGGFALSPRGHAALERYDADLRRHCRQSALRHALNALVVVAGIAALEAGGTI HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE HAPSRPADDGLDTPHSCAPADADGSDGSGCGRFFSEGPSAIAPAPFRLDTVHRPVPSAGI ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC EPSGARRHGAHKGARPGAVWPRVAPSGAAGTGGHRLAAGQQSA CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure AGAARQGGAPAGPARQRHCSFFRQRKVPHRAGARRKPGRPVPLVAVARASQTTESAMFI CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEHHCCCHHHHHHHH NQWFLRRALAMACVRPIGSADPTGRPQVIAHLAAQAGHARRLLVTGLDGDRVSVLGGEAA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCC PAATTLAGLGRQQLSYVVYLRRYMFHEREAWRVVLGVRLHGYRLAAWLGDLRMRGFWHAN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCEECCC APRAARMEVLGRIAALSAELSSQVAPAALLALADWPQVPRDAAVDERRRCLERITATLVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AGYVRKTAAGGFALSPRGHAALERYDADLRRHCRQSALRHALNALVVVAGIAALEAGGTI HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE HAPSRPADDGLDTPHSCAPADADGSDGSGCGRFFSEGPSAIAPAPFRLDTVHRPVPSAGI ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC EPSGARRHGAHKGARPGAVWPRVAPSGAAGTGGHRLAAGQQSA CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA