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The map label for this gene is blc [H]

Identifier: 238027378

GI number: 238027378

Start: 1946871

End: 1947428

Strand: Reverse

Name: blc [H]

Synonym: bglu_1g17730

Alternate gene names: 238027378

Gene position: 1947428-1946871 (Counterclockwise)

Preceding gene: 238027380

Following gene: 238027377

Centisome position: 49.85

GC content: 68.82

Gene sequence:

>558_bases
ATGAATCGATCTCTGGTACGTCTCGCTGCATTGACCGTCGCCGTGTCCGGCGCCGCGCTGCTGCTCAACGGCTGCGGCCT
GATCGGCGGCAAGCGCGGCAACGCGGCCGTACCACAACCGGCCAGGCCCGTCGAACTCGATCGCTATCTGGGGCGCTGGT
ACGAGTTCGCGCGCTACGAGAACCGTTTCGAGCGCGGTTGCGACGGCGTGACCGCCGACTACGCGCGGCTACCGGACGGC
CTGATCGAGGTCGTCAACGCCTGCGCGCGCGATGCGAACGGCGCGCCGCGCGTCTCGAAGGGCCGTGCGAAGCCGGTGCC
CGACAGCATGGGCGCGAAGCTGAAGGTGTCGTTCTTCGGCCCGTTCTATGTCGGCGACTACTGGGTGCTCGACCATGCGG
ACGACTACAGCTGGTCGATCGTCGGCGAACCGTCGGGGCGCTTTCTCTGGCTGCTGACGCGCGAGGCGCATCCGTCCGCG
CTGCTGCGCCAGCAGCTCGTCGCGCGCGCGGCCGAACTCGGCTACGACACCTCGCTGCTGCGCATGACGGCGCAGTAG

Upstream 100 bases:

>100_bases
AACGCACGGACCGCCAGCGCGCGGGCCGTGCCACGGTTCGCGCGCAGGTGGTATCGAACCTGCTTGCGCGGTGCAGATTG
TCCATGACAAGGAAACCCGA

Downstream 100 bases:

>100_bases
GCGCGCGGACCGCCCGGGGCCGGGCGTGAGGCCCGGCCGCGTCCTGCCCGCCTGCCGCGCGGCTCCCTATACTGGCTTGT
TTCCATTGCGATGCCTCGAC

Product: lipocalin family protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNRSLVRLAALTVAVSGAALLLNGCGLIGGKRGNAAVPQPARPVELDRYLGRWYEFARYENRFERGCDGVTADYARLPDG
LIEVVNACARDANGAPRVSKGRAKPVPDSMGAKLKVSFFGPFYVGDYWVLDHADDYSWSIVGEPSGRFLWLLTREAHPSA
LLRQQLVARAAELGYDTSLLRMTAQ

Sequences:

>Translated_185_residues
MNRSLVRLAALTVAVSGAALLLNGCGLIGGKRGNAAVPQPARPVELDRYLGRWYEFARYENRFERGCDGVTADYARLPDG
LIEVVNACARDANGAPRVSKGRAKPVPDSMGAKLKVSFFGPFYVGDYWVLDHADDYSWSIVGEPSGRFLWLLTREAHPSA
LLRQQLVARAAELGYDTSLLRMTAQ
>Mature_185_residues
MNRSLVRLAALTVAVSGAALLLNGCGLIGGKRGNAAVPQPARPVELDRYLGRWYEFARYENRFERGCDGVTADYARLPDG
LIEVVNACARDANGAPRVSKGRAKPVPDSMGAKLKVSFFGPFYVGDYWVLDHADDYSWSIVGEPSGRFLWLLTREAHPSA
LLRQQLVARAAELGYDTSLLRMTAQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=173, Percent_Identity=36.9942196531792, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20273; Mature: 20273

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSLVRLAALTVAVSGAALLLNGCGLIGGKRGNAAVPQPARPVELDRYLGRWYEFARYE
CCCHHHHHHHHHHHHCCHHEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRFERGCDGVTADYARLPDGLIEVVNACARDANGAPRVSKGRAKPVPDSMGAKLKVSFFG
HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PFYVGDYWVLDHADDYSWSIVGEPSGRFLWLLTREAHPSALLRQQLVARAAELGYDTSLL
CEECCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHE
RMTAQ
EEECC
>Mature Secondary Structure
MNRSLVRLAALTVAVSGAALLLNGCGLIGGKRGNAAVPQPARPVELDRYLGRWYEFARYE
CCCHHHHHHHHHHHHCCHHEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRFERGCDGVTADYARLPDGLIEVVNACARDANGAPRVSKGRAKPVPDSMGAKLKVSFFG
HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PFYVGDYWVLDHADDYSWSIVGEPSGRFLWLLTREAHPSALLRQQLVARAAELGYDTSLL
CEECCCEEEEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHE
RMTAQ
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]