| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027366
Identifier: 238027366
GI number: 238027366
Start: 1933504
End: 1934157
Strand: Direct
Name: 238027366
Synonym: bglu_1g17600
Alternate gene names: NA
Gene position: 1933504-1934157 (Clockwise)
Preceding gene: 238027365
Following gene: 238027368
Centisome position: 49.49
GC content: 70.03
Gene sequence:
>654_bases ATGGAACCGCAGTTGTTGACCTATGCGCCGACGCCGCCGGCACGGCCGGCGGCACTCCAGGAAACGCCGGCGGCTGTCAT CGACCTGCCGCGCCCCTGCCTCGACGGCGGCGTGCCACTGATGGCGGCGCTGGCGTCTCGCTCGAGTTGCCGGTCCTTCG CCGCGGAGGCGCTGCCGCCGGCCTCGCTCGGCGCGATGCTGTGGGCCGCCGATGGCATCAACCGCCCCGGCAGCGCGGGC CGCACCGCGCCATCGGCATACGGGGCCGATGCAATCGACCTTTACGTGGCCTTGCCTGGCGGCGTGTATCGCTACGATCC GCTCATGCATCTGCTGCTGCTCAAGCACGCGGTCGATGCCCGCAACCTGACGGGCTACCAGGATTTCGTGGGGCAGGCCC CGCTCGACCTGGTCTATGTGGTCCGCACCGCCGCACTGGCGGGCATGCCGCCTTCGCAGCTCGATATCTTCGCGGCCGTC GAAGCCGGCGCGATCGCCCAGAACGTGGCGCTCTACTGCGCCGCGGCCGGCTTGGGATCGGTGGTGCGCGGCTGGATCAA TCATCGTGCGCTGGCCGAGGCGCTGAGCCTGAACGAGGACGAATTGCCGATCCTCGCACAGACCATCGGCTTCCCCGGCC ATCTCGCGGCCTAG
Upstream 100 bases:
>100_bases CGATTGACCAGGGTCAAGCGCCGACCAAGCCGCCGGCTTATCGTCCAATCACCGCCGTTCCATGTCGGGCCGATGGCGGG ATCGCTCAGGAGAATCGCAG
Downstream 100 bases:
>100_bases CCCGCTCGGGGCTGGTGTGCACGGTACAAACAAAACCCCGCGGGAGCGGGGCTAGACAGCTACGGCCGGTGGTATCCGCC CACCACGCCGCGCCGCGACA
Product: nitroreductase
Products: NA
Alternate protein names: NAD(P)H-Flavin Oxidoreductase; Nitroreductase Family Protein; NADH Oxidase NoxC-Like Protein; SagB-Type Dehydrogenase Domain; NADH Oxidase; Oxidoreductase; NADH Oxidase NoxC-Like
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MEPQLLTYAPTPPARPAALQETPAAVIDLPRPCLDGGVPLMAALASRSSCRSFAAEALPPASLGAMLWAADGINRPGSAG RTAPSAYGADAIDLYVALPGGVYRYDPLMHLLLLKHAVDARNLTGYQDFVGQAPLDLVYVVRTAALAGMPPSQLDIFAAV EAGAIAQNVALYCAAAGLGSVVRGWINHRALAEALSLNEDELPILAQTIGFPGHLAA
Sequences:
>Translated_217_residues MEPQLLTYAPTPPARPAALQETPAAVIDLPRPCLDGGVPLMAALASRSSCRSFAAEALPPASLGAMLWAADGINRPGSAG RTAPSAYGADAIDLYVALPGGVYRYDPLMHLLLLKHAVDARNLTGYQDFVGQAPLDLVYVVRTAALAGMPPSQLDIFAAV EAGAIAQNVALYCAAAGLGSVVRGWINHRALAEALSLNEDELPILAQTIGFPGHLAA >Mature_217_residues MEPQLLTYAPTPPARPAALQETPAAVIDLPRPCLDGGVPLMAALASRSSCRSFAAEALPPASLGAMLWAADGINRPGSAG RTAPSAYGADAIDLYVALPGGVYRYDPLMHLLLLKHAVDARNLTGYQDFVGQAPLDLVYVVRTAALAGMPPSQLDIFAAV EAGAIAQNVALYCAAAGLGSVVRGWINHRALAEALSLNEDELPILAQTIGFPGHLAA
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22475; Mature: 22475
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPQLLTYAPTPPARPAALQETPAAVIDLPRPCLDGGVPLMAALASRSSCRSFAAEALPP CCCCEEEECCCCCCCCCCHHHCCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCC ASLGAMLWAADGINRPGSAGRTAPSAYGADAIDLYVALPGGVYRYDPLMHLLLLKHAVDA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC RNLTGYQDFVGQAPLDLVYVVRTAALAGMPPSQLDIFAAVEAGAIAQNVALYCAAAGLGS CCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGWINHRALAEALSLNEDELPILAQTIGFPGHLAA HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MEPQLLTYAPTPPARPAALQETPAAVIDLPRPCLDGGVPLMAALASRSSCRSFAAEALPP CCCCEEEECCCCCCCCCCHHHCCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCC ASLGAMLWAADGINRPGSAGRTAPSAYGADAIDLYVALPGGVYRYDPLMHLLLLKHAVDA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC RNLTGYQDFVGQAPLDLVYVVRTAALAGMPPSQLDIFAAVEAGAIAQNVALYCAAAGLGS CCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGWINHRALAEALSLNEDELPILAQTIGFPGHLAA HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA