| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027364
Identifier: 238027364
GI number: 238027364
Start: 1930308
End: 1930679
Strand: Reverse
Name: 238027364
Synonym: bglu_1g17560
Alternate gene names: NA
Gene position: 1930679-1930308 (Counterclockwise)
Preceding gene: 238027367
Following gene: 238027363
Centisome position: 49.42
GC content: 56.72
Gene sequence:
>372_bases ATGGATCTAGCCCCGACAGTCATCGAGCAATATGAAGCGGCGCTTCGAACTGCAATGCTCGCCAACGACGTCGAAGCGCT CGACGAATTGTTGGACGATGACCTGGTATTCACTGCGCCTAATGGACAGGTACTCTCGAAGGACGACGATCTTTCGGCTC ATCGCGAGAAGCTTTTGCGTCTCGATAGACTCGATCTTCACGAGACCCAAGCGCACGCGGTAGGCGAGATGATCCTGACT ACCACAAAGGCGACGCTCGTTGGCCACTTCGGCGCAATGGCTATTGACGGGACGTTTGCCTACACACGTTTGTGGCGTCA ATCCGGCACACGCTGGCGCATCGTCGCTGGGCACGCGGCCGAGATCACATAA
Upstream 100 bases:
>100_bases TCAAACACGAGTAGGCGCTGGTTCCAGGGACGTTGATCGGCTCACCGCTACTCGCCTACTACCGACATCTACGACTTCTT TTGCGATGCGAAGACCCGAT
Downstream 100 bases:
>100_bases ACACGCTTGCCGACCGAGTGCGTTTCATCGTGCAGGGTCTGGAAGAAGGGGCAATAGGACATCTGACGCTCCTTTCGGGA GAGAGAGGCAGCTTCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDLAPTVIEQYEAALRTAMLANDVEALDELLDDDLVFTAPNGQVLSKDDDLSAHREKLLRLDRLDLHETQAHAVGEMILT TTKATLVGHFGAMAIDGTFAYTRLWRQSGTRWRIVAGHAAEIT
Sequences:
>Translated_123_residues MDLAPTVIEQYEAALRTAMLANDVEALDELLDDDLVFTAPNGQVLSKDDDLSAHREKLLRLDRLDLHETQAHAVGEMILT TTKATLVGHFGAMAIDGTFAYTRLWRQSGTRWRIVAGHAAEIT >Mature_123_residues MDLAPTVIEQYEAALRTAMLANDVEALDELLDDDLVFTAPNGQVLSKDDDLSAHREKLLRLDRLDLHETQAHAVGEMILT TTKATLVGHFGAMAIDGTFAYTRLWRQSGTRWRIVAGHAAEIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13618; Mature: 13618
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAPTVIEQYEAALRTAMLANDVEALDELLDDDLVFTAPNGQVLSKDDDLSAHREKLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH LDRLDLHETQAHAVGEMILTTTKATLVGHFGAMAIDGTFAYTRLWRQSGTRWRIVAGHAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCEEEEEECCCC EIT CCC >Mature Secondary Structure MDLAPTVIEQYEAALRTAMLANDVEALDELLDDDLVFTAPNGQVLSKDDDLSAHREKLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH LDRLDLHETQAHAVGEMILTTTKATLVGHFGAMAIDGTFAYTRLWRQSGTRWRIVAGHAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCEEEEEECCCC EIT CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA