Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027357

Identifier: 238027357

GI number: 238027357

Start: 1924125

End: 1924622

Strand: Direct

Name: 238027357

Synonym: bglu_1g17470

Alternate gene names: NA

Gene position: 1924125-1924622 (Clockwise)

Preceding gene: 238027356

Following gene: 238027358

Centisome position: 49.25

GC content: 63.86

Gene sequence:

>498_bases
ATGCTGCTCTCTCTCGGACAATTCGTTTTCGGCACACTCACGGCGCCGTTTAGCGAAATGCAGCGTCGCCGCACGTGGAA
GTTCGCGAGCAATTCGCGCGTCGGCGCGCGCGATGCGCGTCAGTTCGCGGGGCCGGGCGACGACACGTTCACGATGCAAG
GCATGATCGCAACGGGGGTGCTCGGCTCGCCTATCTCGATGGACCTGATTTCCGAGATGGCGAACACGGGCGATGCGTAC
GTGCTGGTGGATGGGCGCGGCGTCGTCTACGGTGCATACGTGATAGACGAGCTACACGAAACGCACTCGTATTTCACGAT
CCTCGGCGTGCCGCAGAAAATCGAATTCACGCTGACGATCACGCGCGTGGACGATCGCGCACTCGCGGCGTCGGTTGACG
GCGGCGCCGCGACGAGCGAGCCGACGACTGGATCGCTCGACAAGGCACCGGCCGGGGCGACGCCGCCCTACGTCAAGCCG
AAAGCGAAGAAGGGGTAG

Upstream 100 bases:

>100_bases
AACGTGAAGGAATTCGAGGCAGCCGTGCGCCGTGTGATTGATCAGGTCGAGCGCGAGGATCGTCGTCGCGTCAGCTCGCG
CCTGTCCGACTGAGGCCGCC

Downstream 100 bases:

>100_bases
GGCGATGGCGGATTTTGTGCAATCGGCCAAGCTGCCGACGCGGCGACTCGTCCCATACGCTGATTACCGCATCACCCTCG
ACGGGCGCGACCTGTCACGC

Product: phage protein U

Products: NA

Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Protein U; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Fels-2 Prophage Protein; Bacteriophage P2 Tail Protein GPU; Tail Protein; Tail Protein U

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY
VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP
KAKKG

Sequences:

>Translated_165_residues
MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY
VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP
KAKKG
>Mature_165_residues
MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGVLGSPISMDLISEMANTGDAY
VLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTITRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKP
KAKKG

Specific function: Unknown

COG id: COG3499

COG function: function code R; Phage protein U

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17567; Mature: 17567

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGV
CEECCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCEEEECC
LGSPISMDLISEMANTGDAYVLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTI
CCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEEE
TRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKPKAKKG
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLSLGQFVFGTLTAPFSEMQRRRTWKFASNSRVGARDARQFAGPGDDTFTMQGMIATGV
CEECCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCEEEECC
LGSPISMDLISEMANTGDAYVLVDGRGVVYGAYVIDELHETHSYFTILGVPQKIEFTLTI
CCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEEE
TRVDDRALAASVDGGAATSEPTTGSLDKAPAGATPPYVKPKAKKG
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA