| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027354
Identifier: 238027354
GI number: 238027354
Start: 1920210
End: 1920719
Strand: Direct
Name: 238027354
Synonym: bglu_1g17440
Alternate gene names: NA
Gene position: 1920210-1920719 (Clockwise)
Preceding gene: 238027353
Following gene: 238027355
Centisome position: 49.15
GC content: 60.2
Gene sequence:
>510_bases ATGGGAATGCCGTCCAAACTGAAGCACTTCAACGTGTTTCTCAACGGCGTGTCGTATATCGGGCAGACGGCGGAACTGAC GTTGCCGAAGCTCACGCGCAAGATGGAGGAATGGCGCGGCGGCGGCATGGTGGCGCCGGTGAAATACGATTTCGGGCCGG AGGCGATGGAATTGGAGTGGTCGCTCGGCGGGATCGACAAGAACATGCTGAACCAGTGGGGCACCCCGTCCGTCGATGGC GTGATGCTGCGCTTCGCTGGTGCCTACAAGAACGACAGCGACGACGAGTGGACCGCAGTCGAAATCGTCGGGCGCGGCCG TTACTCCGAAGTGGATTTCGGCAATGCGAAAGCGGGCGACGACACCACGACCAAGGCAACGATGGCGCTGGCCTACTACA AGCTGTCCATCAACGGCGAAACCGTGATCGAAATCGACGCGCAGAACTTCATCGAACTGGTGGGCGGCAAGGATGCGCTC ACGCAGGTCCGCAAGATCATCGGCGTCTAA
Upstream 100 bases:
>100_bases ACCGACCAGTATCTGGCCGATTTCGCGTCGCAGGTCAACGCGTAACGCACCCGCCTGGACAAGTCGTCCGGGCCAGACAT AGGGAAGGGAGGATAGAAAA
Downstream 100 bases:
>100_bases GCGCAACGTGCGGCGTGACCGCACTCCAACCCTCACCACACTGAGAAACGAAAATGAAAGAACTGAACACTGAAAACACC CATACGCTCGATCAGCCGAT
Product: phage major tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage-Related Tail Tube Protein; Phage Tail Tube Protein FII; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Phage Tail Fiber Component; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Phage Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGMPSKLKHFNVFLNGVSYIGQTAELTLPKLTRKMEEWRGGGMVAPVKYDFGPEAMELEWSLGGIDKNMLNQWGTPSVDG VMLRFAGAYKNDSDDEWTAVEIVGRGRYSEVDFGNAKAGDDTTTKATMALAYYKLSINGETVIEIDAQNFIELVGGKDAL TQVRKIIGV
Sequences:
>Translated_169_residues MGMPSKLKHFNVFLNGVSYIGQTAELTLPKLTRKMEEWRGGGMVAPVKYDFGPEAMELEWSLGGIDKNMLNQWGTPSVDG VMLRFAGAYKNDSDDEWTAVEIVGRGRYSEVDFGNAKAGDDTTTKATMALAYYKLSINGETVIEIDAQNFIELVGGKDAL TQVRKIIGV >Mature_168_residues GMPSKLKHFNVFLNGVSYIGQTAELTLPKLTRKMEEWRGGGMVAPVKYDFGPEAMELEWSLGGIDKNMLNQWGTPSVDGV MLRFAGAYKNDSDDEWTAVEIVGRGRYSEVDFGNAKAGDDTTTKATMALAYYKLSINGETVIEIDAQNFIELVGGKDALT QVRKIIGV
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18578; Mature: 18447
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMPSKLKHFNVFLNGVSYIGQTAELTLPKLTRKMEEWRGGGMVAPVKYDFGPEAMELEW CCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEE SLGGIDKNMLNQWGTPSVDGVMLRFAGAYKNDSDDEWTAVEIVGRGRYSEVDFGNAKAGD ECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC DTTTKATMALAYYKLSINGETVIEIDAQNFIELVGGKDALTQVRKIIGV CCCHHHEEEEEEEEEEECCCEEEEECHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure GMPSKLKHFNVFLNGVSYIGQTAELTLPKLTRKMEEWRGGGMVAPVKYDFGPEAMELEW CCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEE SLGGIDKNMLNQWGTPSVDGVMLRFAGAYKNDSDDEWTAVEIVGRGRYSEVDFGNAKAGD ECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC DTTTKATMALAYYKLSINGETVIEIDAQNFIELVGGKDALTQVRKIIGV CCCHHHEEEEEEEEEEECCCEEEEECHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA