| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027338
Identifier: 238027338
GI number: 238027338
Start: 1908516
End: 1909016
Strand: Direct
Name: 238027338
Synonym: bglu_1g17280
Alternate gene names: NA
Gene position: 1908516-1909016 (Clockwise)
Preceding gene: 238027337
Following gene: 238027339
Centisome position: 48.85
GC content: 68.66
Gene sequence:
>501_bases ATGAACGATTTCGTTTCGACCGCACCTGTCCCGGCTGCGACCGCGCCGAAACCGGCCGATCCTGCCGTCGCCTCGGTCAT CCCGGGCGATGGATGGTTTCCCGAAATCGATCTGCGCGTTGCCCGTGAAGTGATGCGCCTGCAAGACGGCACGATCACCG ATGCGCGGCTTCGCGATGCGGTGGTCGAAGGCATCGCGCACACCCGGGACGTGCTTGCCGCGTGGCGCGCCGATCGCGAG CGCGACGGCGCGGCCGATCTGGCGGCGACCCTGAGCGGCGAAGTGGACGGCGTGAACGTGCAGGTGTCGCGCTTTCGCCG GGCCGTGTACGCGTGGGCGCTCGCATGGCTGGTCGAGCGCTATCGCGGTTACGACACGTCGGCCAGTGGCGCGCGTCGGG CGGAGGCGCTGGATTGCCTGCCGGAAGACGCGCGGCGTGATGCGTATTGGGCCGTCTCGGACATCATGCGACGCCAGCGC GTCACGGTGGACCTGATCTGA
Upstream 100 bases:
>100_bases GTAACGCGTCCCTCGCGACGTGGCGGCACGCGTGCCGGGCGGCAGGCATTGCGCCTTGCCAAGGGGCACGCGTCCACCGC CACCCCGAAGCGGTGTCGCG
Downstream 100 bases:
>100_bases TGAAGGTACGCGCACAACAAAACGAAACCGTCGACGCGCTCTGCTGGCGTTGGTACGGCCGCACCGATGGCGTGGTCGAG GCGGTGTTAGAGGCGAACCC
Product: bacteriophage head completion/stabilization protein
Products: NA
Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion Protein; Phage Head Completion/Stabilization Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Phage-Related Head Completion/Stabilization Protein; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNDFVSTAPVPAATAPKPADPAVASVIPGDGWFPEIDLRVAREVMRLQDGTITDARLRDAVVEGIAHTRDVLAAWRADRE RDGAADLAATLSGEVDGVNVQVSRFRRAVYAWALAWLVERYRGYDTSASGARRAEALDCLPEDARRDAYWAVSDIMRRQR VTVDLI
Sequences:
>Translated_166_residues MNDFVSTAPVPAATAPKPADPAVASVIPGDGWFPEIDLRVAREVMRLQDGTITDARLRDAVVEGIAHTRDVLAAWRADRE RDGAADLAATLSGEVDGVNVQVSRFRRAVYAWALAWLVERYRGYDTSASGARRAEALDCLPEDARRDAYWAVSDIMRRQR VTVDLI >Mature_166_residues MNDFVSTAPVPAATAPKPADPAVASVIPGDGWFPEIDLRVAREVMRLQDGTITDARLRDAVVEGIAHTRDVLAAWRADRE RDGAADLAATLSGEVDGVNVQVSRFRRAVYAWALAWLVERYRGYDTSASGARRAEALDCLPEDARRDAYWAVSDIMRRQR VTVDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18281; Mature: 18281
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDFVSTAPVPAATAPKPADPAVASVIPGDGWFPEIDLRVAREVMRLQDGTITDARLRDA CCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH VVEGIAHTRDVLAAWRADRERDGAADLAATLSGEVDGVNVQVSRFRRAVYAWALAWLVER HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YRGYDTSASGARRAEALDCLPEDARRDAYWAVSDIMRRQRVTVDLI HCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MNDFVSTAPVPAATAPKPADPAVASVIPGDGWFPEIDLRVAREVMRLQDGTITDARLRDA CCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH VVEGIAHTRDVLAAWRADRERDGAADLAATLSGEVDGVNVQVSRFRRAVYAWALAWLVER HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YRGYDTSASGARRAEALDCLPEDARRDAYWAVSDIMRRQRVTVDLI HCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA