The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027333

Identifier: 238027333

GI number: 238027333

Start: 1902729

End: 1903784

Strand: Reverse

Name: 238027333

Synonym: bglu_1g17230

Alternate gene names: NA

Gene position: 1903784-1902729 (Counterclockwise)

Preceding gene: 238027334

Following gene: 238027330

Centisome position: 48.73

GC content: 60.61

Gene sequence:

>1056_bases
ATGAGCACCGCCCTCGTTCCGACCACCGACGCGCACGACGTTGCAACGCGCGCGCCGCTGTCCTCAATCGAAACGTTCAC
GTTCGGCGATGCTGTCGCCGCGATCGACGGCGCCGACATTCTCGACTACGCCGAGCTGTGGGCGATCGACGACTATTTCG
AGCCGCCGATCAGCCGCGCCGGGCTCGCGAAATCGCTTCGTGCGGGCACGCATCACGCGTCCGCGCTGTACTTCAAACGA
AACGTGCTCGCCTCGACGTTCATCGAGCATCCGAAGTTTTCGCGCGATGCGTTCCGGCGCCTCGCCCTCGATTTTCTAGT
TTTCGGCGACGCGTACCTCGAACGCGAGCGCAACCGCGCAGGTGGAGCACTCCGATACCGCCCTTCCCCAGCGAAATACA
CGCGCCGAAAAACGGATCTGGTCAATTTCGTGTTCATCGACGGCTTTCTCAACCGCCACCAGTTCGACACAGGGTCGATC
TTTCAGCTAATGGAACCGGACGTGAATCAGGAGGTGTATGGCATGCCCGAGTACGTCGCATCGCTGCAATCCGCGTGGCT
GAACGAATCGGCCACGCTGTTCCGGCGCCGCTACTACGCGAACGGCTCGCACGCGGGGTTCATCCTGTACCTCAACGACC
CGAACATGGACCCGGACGACGTAGACGCGATCCGGAAGGCGTTGCGCGACTCGAAGGGCATCGGCAATTTCCGGAACCTG
TTTTTGCACTCGGCCGCGCGAAACAGCGGCGGCGAAAAAGGCGCGGTCCAACTGATCCCGATTTCCGAGGTTGCAGCGAA
AGACCAGTTTTTCGACATCAAGAACGTAACGCGCGACGACACGCTCGCGGCCCACCGCGTGCCGCCGCAGTTGCTCGGCA
TCGTCCCGAGCAACACGGGCGGGTTCGGTGCGGCCGACACTGCCGCGCGCGTGTTCGGACGGAACGAAATCCTTCCGCTA
CAACAGCAATTTCTCAAAATTAATGAATGGGCAGGCGAGGAAATTGTTCGATTTACCGACTATATCGTTCCGGCCGCATC
AATCTCTCATCCTTGA

Upstream 100 bases:

>100_bases
AAATCGGCCACGCTGACCTCGCATGGGCCTGCCTTCACGCGCTCGATAACGAACCCCTCGAAGGTGCCAGCCGCGCACGC
AGCACCGTGGAGATTTACTG

Downstream 100 bases:

>100_bases
TCCTGTATGCAAGATAAATTACGGCGGCCATGAATTCCCTCATCCTGATTCCCGTTACCAGACTGACCAGTCACTGTATG
GCATTTCTCCCGTCTGCCGG

Product: putative phage portal vertex protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSTALVPTTDAHDVATRAPLSSIETFTFGDAVAAIDGADILDYAELWAIDDYFEPPISRAGLAKSLRAGTHHASALYFKR
NVLASTFIEHPKFSRDAFRRLALDFLVFGDAYLERERNRAGGALRYRPSPAKYTRRKTDLVNFVFIDGFLNRHQFDTGSI
FQLMEPDVNQEVYGMPEYVASLQSAWLNESATLFRRRYYANGSHAGFILYLNDPNMDPDDVDAIRKALRDSKGIGNFRNL
FLHSAARNSGGEKGAVQLIPISEVAAKDQFFDIKNVTRDDTLAAHRVPPQLLGIVPSNTGGFGAADTAARVFGRNEILPL
QQQFLKINEWAGEEIVRFTDYIVPAASISHP

Sequences:

>Translated_351_residues
MSTALVPTTDAHDVATRAPLSSIETFTFGDAVAAIDGADILDYAELWAIDDYFEPPISRAGLAKSLRAGTHHASALYFKR
NVLASTFIEHPKFSRDAFRRLALDFLVFGDAYLERERNRAGGALRYRPSPAKYTRRKTDLVNFVFIDGFLNRHQFDTGSI
FQLMEPDVNQEVYGMPEYVASLQSAWLNESATLFRRRYYANGSHAGFILYLNDPNMDPDDVDAIRKALRDSKGIGNFRNL
FLHSAARNSGGEKGAVQLIPISEVAAKDQFFDIKNVTRDDTLAAHRVPPQLLGIVPSNTGGFGAADTAARVFGRNEILPL
QQQFLKINEWAGEEIVRFTDYIVPAASISHP
>Mature_350_residues
STALVPTTDAHDVATRAPLSSIETFTFGDAVAAIDGADILDYAELWAIDDYFEPPISRAGLAKSLRAGTHHASALYFKRN
VLASTFIEHPKFSRDAFRRLALDFLVFGDAYLERERNRAGGALRYRPSPAKYTRRKTDLVNFVFIDGFLNRHQFDTGSIF
QLMEPDVNQEVYGMPEYVASLQSAWLNESATLFRRRYYANGSHAGFILYLNDPNMDPDDVDAIRKALRDSKGIGNFRNLF
LHSAARNSGGEKGAVQLIPISEVAAKDQFFDIKNVTRDDTLAAHRVPPQLLGIVPSNTGGFGAADTAARVFGRNEILPLQ
QQFLKINEWAGEEIVRFTDYIVPAASISHP

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39052; Mature: 38921

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALVPTTDAHDVATRAPLSSIETFTFGDAVAAIDGADILDYAELWAIDDYFEPPISRA
CCCCCCCCCCCHHHHHHCCHHHCCEEECCCHHHHCCCCHHHHHHHHHCCCHHCCCCHHHH
GLAKSLRAGTHHASALYFKRNVLASTFIEHPKFSRDAFRRLALDFLVFGDAYLERERNRA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GGALRYRPSPAKYTRRKTDLVNFVFIDGFLNRHQFDTGSIFQLMEPDVNQEVYGMPEYVA
CCEEEECCCCHHHHHHHHHHEEEEEEECHHHHCCCCCCCCHHHCCCCCCCHHCCCHHHHH
SLQSAWLNESATLFRRRYYANGSHAGFILYLNDPNMDPDDVDAIRKALRDSKGIGNFRNL
HHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH
FLHSAARNSGGEKGAVQLIPISEVAAKDQFFDIKNVTRDDTLAAHRVPPQLLGIVPSNTG
HHHHHHHCCCCCCCCEEEEEHHHHHHCCHHEHHHCCCCCCCHHHHCCCHHHEEEECCCCC
GFGAADTAARVFGRNEILPLQQQFLKINEWAGEEIVRFTDYIVPAASISHP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STALVPTTDAHDVATRAPLSSIETFTFGDAVAAIDGADILDYAELWAIDDYFEPPISRA
CCCCCCCCCCHHHHHHCCHHHCCEEECCCHHHHCCCCHHHHHHHHHCCCHHCCCCHHHH
GLAKSLRAGTHHASALYFKRNVLASTFIEHPKFSRDAFRRLALDFLVFGDAYLERERNRA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GGALRYRPSPAKYTRRKTDLVNFVFIDGFLNRHQFDTGSIFQLMEPDVNQEVYGMPEYVA
CCEEEECCCCHHHHHHHHHHEEEEEEECHHHHCCCCCCCCHHHCCCCCCCHHCCCHHHHH
SLQSAWLNESATLFRRRYYANGSHAGFILYLNDPNMDPDDVDAIRKALRDSKGIGNFRNL
HHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH
FLHSAARNSGGEKGAVQLIPISEVAAKDQFFDIKNVTRDDTLAAHRVPPQLLGIVPSNTG
HHHHHHHCCCCCCCCEEEEEHHHHHHCCHHEHHHCCCCCCCHHHHCCCHHHEEEECCCCC
GFGAADTAARVFGRNEILPLQQQFLKINEWAGEEIVRFTDYIVPAASISHP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]