| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027327
Identifier: 238027327
GI number: 238027327
Start: 1897437
End: 1898384
Strand: Direct
Name: 238027327
Synonym: bglu_1g17170
Alternate gene names: NA
Gene position: 1897437-1898384 (Clockwise)
Preceding gene: 238027326
Following gene: 339905966
Centisome position: 48.57
GC content: 61.92
Gene sequence:
>948_bases ATGAATGCTGCAACGACCGTACAGGCTGAAATGGAATTGGTGCCGGGCAACGTGAAAGAGATCGTGAAGCCGTTCCGGCA GGGCACGGCCGACGTCTACATGGTTTCGCTCGATGCGATCCGCGTCCGGCCCGAGTTCAACGAAGCGCGCGAAGCTGACC CGGAGTACCCGACGGCCGTTCGTGAAATCGCGGATTCGATCAAGGCGAACGGCTTTTTTCGTCACAAGCCGATCAAGGTC GCGGCAGCGGCCGACGGCTATCTGTACGTGTCAGACGGTCATACGCGGTGGGATGCGGTGTTGCTGGCGAACAGCGAGGG AGCGGGCATCGAAGCGGTGCCGGTGATCAACGAAGTACGCGGCACGACCGAAGAAGATCGGATTTTCGGCCTGATTCTCG ATAACTCCGGTCGCCGCCTGACGCTGCTCGGGGAGGCGATGGTCATCAAACGCCTGATCGGCCGCGGAATCGATGAGAAG GAAATCGCGCGGCGCCTGACGCGCAACGTCGCCTCGATTCGAAACGCGCTCACGCTCGTGGCCGCGCCGAAGCCGATCAA GGAAATGGTCACGTCGGGCGCTGTCTCTGCAACGAGCGCGGTCAAGGTCATGAAGGAACAGGGCGCGAACGCGGTTGCCC ACCTGCAAGCGGCGAAAGAGGTTGCGACGGCGGCCGGTAAGACGAAGGTCACGCCGAAGGCCCTGAAAGCAGTCGGCGGC CAGAAACAAACAGCCAGGTCAAACGATGCCGATCTGCTGGACTGGCTCGAGACGCACGGCAATGTCGCGATTCGGCGGAT GCACCCCGTAGGAGAACAGCCGGTTTTTCAGGTCGAAGTGGCTGATCTCGTTTCGAGGGCGGTTAATGGGGAGGGGCCGG ATATTCGCACCGCGATCATTGCCGCCCGCGAGTGCTGTATAGGCCGGGAGGACGCGTCGCGAGCATGA
Upstream 100 bases:
>100_bases GGCGTGAGTCGCTTTCGCTTTTTGATGACACGCCGGACGGCGGGTCGGTTTCTGATGATGGCGACATTCCGTCGCCGGGG TACTTGAAAGGGGATCAACG
Downstream 100 bases:
>100_bases ACGGGTGCAACGAGCAAGACACTCGCCTAGATACAGAGACATACGAAAGCGTTGGATTCTCTGTATGTAGGACGCGACCC TATCATTTCGCCCAAATAGT
Product: ParB-like partition protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNAATTVQAEMELVPGNVKEIVKPFRQGTADVYMVSLDAIRVRPEFNEAREADPEYPTAVREIADSIKANGFFRHKPIKV AAAADGYLYVSDGHTRWDAVLLANSEGAGIEAVPVINEVRGTTEEDRIFGLILDNSGRRLTLLGEAMVIKRLIGRGIDEK EIARRLTRNVASIRNALTLVAAPKPIKEMVTSGAVSATSAVKVMKEQGANAVAHLQAAKEVATAAGKTKVTPKALKAVGG QKQTARSNDADLLDWLETHGNVAIRRMHPVGEQPVFQVEVADLVSRAVNGEGPDIRTAIIAARECCIGREDASRA
Sequences:
>Translated_315_residues MNAATTVQAEMELVPGNVKEIVKPFRQGTADVYMVSLDAIRVRPEFNEAREADPEYPTAVREIADSIKANGFFRHKPIKV AAAADGYLYVSDGHTRWDAVLLANSEGAGIEAVPVINEVRGTTEEDRIFGLILDNSGRRLTLLGEAMVIKRLIGRGIDEK EIARRLTRNVASIRNALTLVAAPKPIKEMVTSGAVSATSAVKVMKEQGANAVAHLQAAKEVATAAGKTKVTPKALKAVGG QKQTARSNDADLLDWLETHGNVAIRRMHPVGEQPVFQVEVADLVSRAVNGEGPDIRTAIIAARECCIGREDASRA >Mature_315_residues MNAATTVQAEMELVPGNVKEIVKPFRQGTADVYMVSLDAIRVRPEFNEAREADPEYPTAVREIADSIKANGFFRHKPIKV AAAADGYLYVSDGHTRWDAVLLANSEGAGIEAVPVINEVRGTTEEDRIFGLILDNSGRRLTLLGEAMVIKRLIGRGIDEK EIARRLTRNVASIRNALTLVAAPKPIKEMVTSGAVSATSAVKVMKEQGANAVAHLQAAKEVATAAGKTKVTPKALKAVGG QKQTARSNDADLLDWLETHGNVAIRRMHPVGEQPVFQVEVADLVSRAVNGEGPDIRTAIIAARECCIGREDASRA
Specific function: Unknown
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33877; Mature: 33877
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAATTVQAEMELVPGNVKEIVKPFRQGTADVYMVSLDAIRVRPEFNEAREADPEYPTAV CCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHCCCCCCHHHH REIADSIKANGFFRHKPIKVAAAADGYLYVSDGHTRWDAVLLANSEGAGIEAVPVINEVR HHHHHHHHCCCEEECCCEEEEEECCCEEEEECCCCEEEEEEEECCCCCCEEEECCHHHHC GTTEEDRIFGLILDNSGRRLTLLGEAMVIKRLIGRGIDEKEIARRLTRNVASIRNALTLV CCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEE AAPKPIKEMVTSGAVSATSAVKVMKEQGANAVAHLQAAKEVATAAGKTKVTPKALKAVGG ECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC QKQTARSNDADLLDWLETHGNVAIRRMHPVGEQPVFQVEVADLVSRAVNGEGPDIRTAII CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHH AARECCIGREDASRA HHHHHHCCCCCCCCC >Mature Secondary Structure MNAATTVQAEMELVPGNVKEIVKPFRQGTADVYMVSLDAIRVRPEFNEAREADPEYPTAV CCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHCCCCCCHHHH REIADSIKANGFFRHKPIKVAAAADGYLYVSDGHTRWDAVLLANSEGAGIEAVPVINEVR HHHHHHHHCCCEEECCCEEEEEECCCEEEEECCCCEEEEEEEECCCCCCEEEECCHHHHC GTTEEDRIFGLILDNSGRRLTLLGEAMVIKRLIGRGIDEKEIARRLTRNVASIRNALTLV CCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEE AAPKPIKEMVTSGAVSATSAVKVMKEQGANAVAHLQAAKEVATAAGKTKVTPKALKAVGG ECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC QKQTARSNDADLLDWLETHGNVAIRRMHPVGEQPVFQVEVADLVSRAVNGEGPDIRTAII CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHH AARECCIGREDASRA HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA