| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027325
Identifier: 238027325
GI number: 238027325
Start: 1896879
End: 1897157
Strand: Direct
Name: 238027325
Synonym: bglu_1g17150
Alternate gene names: NA
Gene position: 1896879-1897157 (Clockwise)
Preceding gene: 238027324
Following gene: 238027326
Centisome position: 48.56
GC content: 61.65
Gene sequence:
>279_bases ATGAACGTCAGCTATCGCGATCCGCACGACATGTCGATCGAATGTCCCGCATGCGACGGGAAGATCGAGGCGCGTCATTC TGAGCCGATGAGTGACACGATGCGCCGCCTGTATTTCTGGTGCCCCGATTGCGGATTTCGTGCGCCCGCGTCGCTCGAAA TCCTGTATTCGCTGTCTCCGTCGGCGTCGCCGCGTGATGGGCTCGACCTGCCGATCGTGCGTGCTGATCCGCTGGACGGC TCGGTCAATTCCCGCACGTCGAAGCGGATCGGGTTGTGA
Upstream 100 bases:
>100_bases GCGCATCTGCGCGCGTTGCGCACGACGTATCCGACTGGCTGGCCGACTACGACACGGCCGATGCCACGCAGAACCTGCAA CCTAACCATTCGGGAGCCCT
Downstream 100 bases:
>100_bases CATGCGGTGGACCATGCCATGTCCGCACTGCAAGTCGCGGGGTATCGCCCGCGTGATGCGGCGAACGTCAGATTTGTGTT GGAACGTGGATTTCCAGTGC
Product: phage transcriptional activator, Ogr/Delta
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MNVSYRDPHDMSIECPACDGKIEARHSEPMSDTMRRLYFWCPDCGFRAPASLEILYSLSPSASPRDGLDLPIVRADPLDG SVNSRTSKRIGL
Sequences:
>Translated_92_residues MNVSYRDPHDMSIECPACDGKIEARHSEPMSDTMRRLYFWCPDCGFRAPASLEILYSLSPSASPRDGLDLPIVRADPLDG SVNSRTSKRIGL >Mature_92_residues MNVSYRDPHDMSIECPACDGKIEARHSEPMSDTMRRLYFWCPDCGFRAPASLEILYSLSPSASPRDGLDLPIVRADPLDG SVNSRTSKRIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10244; Mature: 10244
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSYRDPHDMSIECPACDGKIEARHSEPMSDTMRRLYFWCPDCGFRAPASLEILYSLSP CCCCCCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHEEECCCCCCCCCCCEEEEEECCC SASPRDGLDLPIVRADPLDGSVNSRTSKRIGL CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNVSYRDPHDMSIECPACDGKIEARHSEPMSDTMRRLYFWCPDCGFRAPASLEILYSLSP CCCCCCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHEEECCCCCCCCCCCEEEEEECCC SASPRDGLDLPIVRADPLDGSVNSRTSKRIGL CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA