| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027321
Identifier: 238027321
GI number: 238027321
Start: 1893662
End: 1894567
Strand: Direct
Name: 238027321
Synonym: bglu_1g17110
Alternate gene names: NA
Gene position: 1893662-1894567 (Clockwise)
Preceding gene: 238027320
Following gene: 238027322
Centisome position: 48.47
GC content: 66.45
Gene sequence:
>906_bases GTGACCGTTACGGCGCCCGTGATCAGCTATTTCGGCAGCAAGTTTCGCGTCGCGCCGTGGGTGCTCTCGCACCTGCCGTC GCACGAAATCTACGTCGAACCGTTCGGTGGCTCGGCCGCCGTTCTTCTGCAGAAGCCGCGAAGCCGTGTCGAGATTTACA ACGATCTCGACGGCGAAATCGTGAACCTGTTCCGTGTGGTGCGTGATGACGCGATGCGGGCGGAGTTAATCGACGCGTTG AACGCGACGCCATACGCACGGGCCGAGTTCGAAGCGGCGTGGAACGAGGCAGACGAGCCGGTCGAGCGCGCACGCCGCTT GTGCGTCCGTGCGCAGATGGGTTTCGGGGCGCTCGGCTCGACGCGCCCGCTGCATTCGCCGATCGGCTTCGCCGCCGACA TATGGTCGGATGGTCCGGGGCAATGGCTGCGGTACCCCGCGCGCCTCGCGGCTGTCGGCGCCCGTTTGAGCGGAACCATG ATCGAGCACATGCCCGCCGTCGAACTGATCGCGAAATATGACGCGCCGGGCGTCCTGTTCTACATCGACCCGCCATACCT GCCCGAAGTGCGCAACAGCGTGTCGCGTGGGCTTGGTCGCGACTATCGCTGCGAAATGTCCGCATTCGAACACGCCGATC TGCTGGCGATGCTCGCGAATCTGCGCGGTATGGCGGTCGTCAGCGGCTACGCGTCGGGAATGTACGACCGCGCACTGGGC GGGTGGGCGCGGTTCACCCGTAGCACGCGAGCGGCCGGGCAGGTTGGCACCGTAGCCCGCGAAGAAGTGGTTTGGGTCTC GCCTGCGGCCTGCGCTGCAACCGGCATCGATCCGCGCACGTCGGTGTGCGTCGGCGACGAGGCGGCGGAAATGCCCCTGT TCGCGACCGGCACGACGCGGGGCTGA
Upstream 100 bases:
>100_bases GGTACGAGGAAAGCGGGGCCGCCCCCGTTTGCTGCATGTCACGCGATGACGCGCTGCGCGCGGCGCGAGACAGCCGCCGA GCGATCTATGCGGAGGCCGC
Downstream 100 bases:
>100_bases CATGGATCAGGGCCGCGACGGCGAGACGGTTTCGACGCGCGAACTGCTGATCGAGGATCTAGCCGATTTCGGCATTGGTG CGGGCGTGCTCGCTACGGCT
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: Methyltransferase; DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; DNA Adenine Methyltransferase; Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage Methylase; Site-Specific DNA-Methyltransferase; Phage Associated Type II DNA-Methyltransferase; Prophage DNA Adenine Methylase; Phage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; DNA Adenine Methylase Subfamily; Prophage DNA Methylase; Phage DNA Methyltransferase
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVTAPVISYFGSKFRVAPWVLSHLPSHEIYVEPFGGSAAVLLQKPRSRVEIYNDLDGEIVNLFRVVRDDAMRAELIDAL NATPYARAEFEAAWNEADEPVERARRLCVRAQMGFGALGSTRPLHSPIGFAADIWSDGPGQWLRYPARLAAVGARLSGTM IEHMPAVELIAKYDAPGVLFYIDPPYLPEVRNSVSRGLGRDYRCEMSAFEHADLLAMLANLRGMAVVSGYASGMYDRALG GWARFTRSTRAAGQVGTVAREEVVWVSPAACAATGIDPRTSVCVGDEAAEMPLFATGTTRG
Sequences:
>Translated_301_residues MTVTAPVISYFGSKFRVAPWVLSHLPSHEIYVEPFGGSAAVLLQKPRSRVEIYNDLDGEIVNLFRVVRDDAMRAELIDAL NATPYARAEFEAAWNEADEPVERARRLCVRAQMGFGALGSTRPLHSPIGFAADIWSDGPGQWLRYPARLAAVGARLSGTM IEHMPAVELIAKYDAPGVLFYIDPPYLPEVRNSVSRGLGRDYRCEMSAFEHADLLAMLANLRGMAVVSGYASGMYDRALG GWARFTRSTRAAGQVGTVAREEVVWVSPAACAATGIDPRTSVCVGDEAAEMPLFATGTTRG >Mature_300_residues TVTAPVISYFGSKFRVAPWVLSHLPSHEIYVEPFGGSAAVLLQKPRSRVEIYNDLDGEIVNLFRVVRDDAMRAELIDALN ATPYARAEFEAAWNEADEPVERARRLCVRAQMGFGALGSTRPLHSPIGFAADIWSDGPGQWLRYPARLAAVGARLSGTMI EHMPAVELIAKYDAPGVLFYIDPPYLPEVRNSVSRGLGRDYRCEMSAFEHADLLAMLANLRGMAVVSGYASGMYDRALGG WARFTRSTRAAGQVGTVAREEVVWVSPAACAATGIDPRTSVCVGDEAAEMPLFATGTTRG
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32743; Mature: 32611
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTAPVISYFGSKFRVAPWVLSHLPSHEIYVEPFGGSAAVLLQKPRSRVEIYNDLDGEI CCCCHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHCCCCHHH VNLFRVVRDDAMRAELIDALNATPYARAEFEAAWNEADEPVERARRLCVRAQMGFGALGS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC TRPLHSPIGFAADIWSDGPGQWLRYPARLAAVGARLSGTMIEHMPAVELIAKYDAPGVLF CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCEEEE YIDPPYLPEVRNSVSRGLGRDYRCEMSAFEHADLLAMLANLRGMAVVSGYASGMYDRALG EECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH GWARFTRSTRAAGQVGTVAREEVVWVSPAACAATGIDPRTSVCVGDEAAEMPLFATGTTR HHHHHHHHHHHCCCCCCHHHCCEEEECCHHHHHCCCCCCCEEEECCCHHCCCEEECCCCC G C >Mature Secondary Structure TVTAPVISYFGSKFRVAPWVLSHLPSHEIYVEPFGGSAAVLLQKPRSRVEIYNDLDGEI CCCHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHCCCCHHH VNLFRVVRDDAMRAELIDALNATPYARAEFEAAWNEADEPVERARRLCVRAQMGFGALGS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC TRPLHSPIGFAADIWSDGPGQWLRYPARLAAVGARLSGTMIEHMPAVELIAKYDAPGVLF CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCEEEE YIDPPYLPEVRNSVSRGLGRDYRCEMSAFEHADLLAMLANLRGMAVVSGYASGMYDRALG EECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH GWARFTRSTRAAGQVGTVAREEVVWVSPAACAATGIDPRTSVCVGDEAAEMPLFATGTTR HHHHHHHHHHHCCCCCCHHHCCEEEECCHHHHHCCCCCCCEEEECCCHHCCCEEECCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA