BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is fabG [H]

Identifier: 238027288

GI number: 238027288

Start: 1843378

End: 1844118

Strand: Direct

Name: fabG [H]

Synonym: bglu_1g16750

Alternate gene names: 238027288

Gene position: 1843378-1844118 (Clockwise)

Preceding gene: 238027287

Following gene: 238027289

Centisome position: 47.19

GC content: 77.6

Gene sequence:

>741_bases
ATGAGCGCGCCGGCGGGGCGCGCGGTGCTGGTGACGGGCGGCACGCGCGGCATCGGCGCGGCGATCGTGCGGCGGCTGGC
GGCGGCCGGCTGGCGCGTGGCGGCCTCCTACCGTCACGACGCGCGGGCGGCCGCCGCGCTCGAACGCGAGCTGGCGGCGG
CGGGCGTGACGGCCGCCGTGCTGCGCGCCGACGTGACCGACCCGCACGCGGCGCGCGCGCTGGCCGAGGAGGCCGCGCGG
CGCCTGGGCGGGCTCGACGCGCTGGTCAACAACGCCGGCATGGTCGACGACGGCGCGTTCGTCACGCTCGAGGCCGAGCG
CTATCTGAACGTGCTGCGCACCAACCTGCTCGGCGCGATCCGCGTCACCGGCGCGGCGCTGCCGCACCTGCTGCGCGGCC
GCGCGCCGGCGGTGGTCAATCTCGCCTCGCTCGGCGGCGTGGCCGGCAAGGAGGGGCAGGTGGCCTACGCGGCCAGCAAG
GGCGGGCTGATCGGCTTCACGCACTGGCTCGCGCGGCGCTACGCGGCCGCGGGACTCACCGCCAACGCGGTGGCGCCCGG
CTTCATCGACACCGAGATGATCGCCGGCCTCACGCCGGCGATGACGGCCCACATCGTCGGCGGCAGCGCGGCGCGGCGCG
TCGGGCAGGCCGACGAGGTGGCGCGCGCGGTGGCGTTCCTGCTCGAACCGGGCTACCTGCACGGCACCACGCTGCGGCTC
GACGGCGGCTTCAACCGTTGA

Upstream 100 bases:

>100_bases
CCGAGAGCCTGTTCCGGCAGGCGCGCGCGCTGCGCATCTACGAGGGCACCTCGGAGATCCAGAAGATCGTGATCGCGGGC
AGCGTCTCGCGCCGTCGCGC

Downstream 100 bases:

>100_bases
GCGCGCCGACACCATCGAGCGGGCACGCAGTTCCCGATACGCAACTTCTTCACGGAGCCCAAGCATGCAACCCGATCCCG
ACGACGACATCACGCTGCTC

Product: 3-ketoacyl-CoA reductase PhaB

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSAPAGRAVLVTGGTRGIGAAIVRRLAAAGWRVAASYRHDARAAAALERELAAAGVTAAVLRADVTDPHAARALAEEAAR
RLGGLDALVNNAGMVDDGAFVTLEAERYLNVLRTNLLGAIRVTGAALPHLLRGRAPAVVNLASLGGVAGKEGQVAYAASK
GGLIGFTHWLARRYAAAGLTANAVAPGFIDTEMIAGLTPAMTAHIVGGSAARRVGQADEVARAVAFLLEPGYLHGTTLRL
DGGFNR

Sequences:

>Translated_246_residues
MSAPAGRAVLVTGGTRGIGAAIVRRLAAAGWRVAASYRHDARAAAALERELAAAGVTAAVLRADVTDPHAARALAEEAAR
RLGGLDALVNNAGMVDDGAFVTLEAERYLNVLRTNLLGAIRVTGAALPHLLRGRAPAVVNLASLGGVAGKEGQVAYAASK
GGLIGFTHWLARRYAAAGLTANAVAPGFIDTEMIAGLTPAMTAHIVGGSAARRVGQADEVARAVAFLLEPGYLHGTTLRL
DGGFNR
>Mature_245_residues
SAPAGRAVLVTGGTRGIGAAIVRRLAAAGWRVAASYRHDARAAAALERELAAAGVTAAVLRADVTDPHAARALAEEAARR
LGGLDALVNNAGMVDDGAFVTLEAERYLNVLRTNLLGAIRVTGAALPHLLRGRAPAVVNLASLGGVAGKEGQVAYAASKG
GLIGFTHWLARRYAAAGLTANAVAPGFIDTEMIAGLTPAMTAHIVGGSAARRVGQADEVARAVAFLLEPGYLHGTTLRLD
GGFNR

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=37.3949579831933, Blast_Score=138, Evalue=4e-33,
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=34.6774193548387, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI59889578, Length=229, Percent_Identity=34.4978165938865, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI31542939, Length=200, Percent_Identity=29.5, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=29.5275590551181, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=29.4820717131474, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=29.4354838709677, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=29.8429319371728, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI7657478, Length=197, Percent_Identity=34.5177664974619, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=25.9067357512953, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4504503, Length=186, Percent_Identity=30.1075268817204, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=30.2040816326531, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI66933014, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=28.740157480315, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI19743808, Length=191, Percent_Identity=32.9842931937173, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=32.4742268041237, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224922801, Length=168, Percent_Identity=29.7619047619048, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4504505, Length=216, Percent_Identity=27.3148148148148, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=25.2631578947368, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=38.5892116182573, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=38.4297520661157, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=29.5081967213115, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=30.7086614173228, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=34.4, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=28.5123966942149, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=24.8979591836735, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=225, Percent_Identity=29.7777777777778, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=27.0491803278689, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=26.5560165975104, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=30.2083333333333, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=34.4262295081967, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=35.1020408163265, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=28.2352941176471, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=31.1023622047244, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=260, Percent_Identity=32.6923076923077, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=28.9473684210526, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=26.6409266409266, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=26.7175572519084, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=27.3408239700375, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=27.0676691729323, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=234, Percent_Identity=27.3504273504274, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=28.4644194756554, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=194, Percent_Identity=28.3505154639175, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=27.7992277992278, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=25.3846153846154, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=27.5303643724696, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=27.8810408921933, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=26.7175572519084, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=27.7566539923954, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=28.2352941176471, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.0155642023346, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=23.9543726235741, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=27.5471698113208, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=200, Percent_Identity=29, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=27.0992366412214, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=200, Percent_Identity=29, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=28.2868525896414, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=25.3731343283582, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=28.7234042553192, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322227, Length=198, Percent_Identity=29.2929292929293, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=36.5079365079365, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=32.2834645669291, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=29.8804780876494, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=29.296875, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=30.5220883534137, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=30.2040816326531, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17737361, Length=248, Percent_Identity=31.0483870967742, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571387, Length=237, Percent_Identity=28.6919831223629, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24665243, Length=238, Percent_Identity=31.0924369747899, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221331218, Length=238, Percent_Identity=31.0924369747899, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24665247, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221331216, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI116007236, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581726, Length=158, Percent_Identity=28.4810126582279, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI21355631, Length=166, Percent_Identity=27.710843373494, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI18859837, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644337, Length=248, Percent_Identity=29.8387096774194, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665264, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25070; Mature: 24939

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAGRAVLVTGGTRGIGAAIVRRLAAAGWRVAASYRHDARAAAALERELAAAGVTAAV
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRADVTDPHAARALAEEAARRLGGLDALVNNAGMVDDGAFVTLEAERYLNVLRTNLLGAI
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
RVTGAALPHLLRGRAPAVVNLASLGGVAGKEGQVAYAASKGGLIGFTHWLARRYAAAGLT
HHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ANAVAPGFIDTEMIAGLTPAMTAHIVGGSAARRVGQADEVARAVAFLLEPGYLHGTTLRL
CCCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE
DGGFNR
CCCCCC
>Mature Secondary Structure 
SAPAGRAVLVTGGTRGIGAAIVRRLAAAGWRVAASYRHDARAAAALERELAAAGVTAAV
CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRADVTDPHAARALAEEAARRLGGLDALVNNAGMVDDGAFVTLEAERYLNVLRTNLLGAI
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
RVTGAALPHLLRGRAPAVVNLASLGGVAGKEGQVAYAASKGGLIGFTHWLARRYAAAGLT
HHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
ANAVAPGFIDTEMIAGLTPAMTAHIVGGSAARRVGQADEVARAVAFLLEPGYLHGTTLRL
CCCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE
DGGFNR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA