Click here to switch to the map view.

The map label for this gene is acdA [H]

Identifier: 238027287

GI number: 238027287

Start: 1842212

End: 1843381

Strand: Direct

Name: acdA [H]

Synonym: bglu_1g16740

Alternate gene names: 238027287

Gene position: 1842212-1843381 (Clockwise)

Preceding gene: 238027286

Following gene: 238027288

Centisome position: 47.16

GC content: 74.1

Gene sequence:

>1170_bases
ATGAAGATTTTCGATCCGGCGATCCTGAACCTGCCGTTCTACGACGCCACCCATCGCGCGCTGGCCGCCGACCTCGAGGC
CTGGGTCGAGGCCCACGCGTGGCTGCCGCACGAGTACGAGCGGCTCGACGCGGCCGAGCGCGGGCGCCTCTACACGCGCC
TGCTCGGCCAGGACGGCTGGCTGCGCCATGCGGTCGATCCGGCGCCGGGCCGCGAACGGCCCGACGTGCGCGCGCTGTGC
CTGATCCGCGAGGCGTTCGCCTATCTCGACGACCTGGTCGATTTCGCGTTCTCGATCCAGGGGCTCGCGGCCGCGCCGAT
CGCCTGGTACGGCAGCGCGGCGCAGCGCGCGGCCTGGCTGCCCGGGCTGCGCGACGGCACCGTCATCGGCTCGCTCGCGC
TGTCGGAACCGGAGGCGGGCTCGAACCTCGCGGCGGTGGCGGTGGCCGCCGAACGCACCGCCGACGGCTATGCGGTGGAC
GGCCTCAAGACCTGGGTGTCGAACGGCGACATCGCCGACCACCACGCGGTGCTGCTGCGCACCGGCGAGGGCCCGGGCGG
GCTCGGGCTGAGCTTCCTCTCGGTGCCGGCCGCCACCGCGGGCGTGACGCCGAACGGCATCGCGCTGCTCGCGCCGCGCG
CGTTCGCCTCGCTCGCGTTCGAGCAGGCCGCGCTGCCGGCCGACGCGCTGATCGGCACGGCCGGCATGGGCTTTCGCTAC
GCGATGGAGATCCTCAACATCTATCGCGCCAGCGTCGGCGCGGCCGCGCTCGGCTTCGCGCGGCGCGCGCTGGCCGCCTC
GCTGGAGTGGGCGCGCGAGCGGCCGGTGGCGGGCGGCAAGCTGCTGCAGCAGCAGTTCACGATCGACAAGATCGCCAACA
TGGCGGCGTTCGCCGACAGCACCGCGCTGCTGGTGGCGCGCACCGCCTGGGAGTTCGACACCGGCGTGGCCGAGGTGGCC
GCGCACGCCAGCATCACCAAGCTGGTCGCCACCGACGGCCTCGCGCGGGTGGCCGACGACGCGGTGCAGCTGTTCGGCGC
GGCCGGGCTGGTGGCCGGCTCGCCGGCCGAGAGCCTGTTCCGGCAGGCGCGCGCGCTGCGCATCTACGAGGGCACCTCGG
AGATCCAGAAGATCGTGATCGCGGGCAGCGTCTCGCGCCGTCGCGCATGA

Upstream 100 bases:

>100_bases
CGGCTGTCGCGCGATTACGCGACGCTGCGCAGCCTGTTCGACGAACTCGGCCTCGCGGGCCTCGCCTGAACGTCATCCAC
CATTCCAGTACGGGAGCAGC

Downstream 100 bases:

>100_bases
GCGCGCCGGCGGGGCGCGCGGTGCTGGTGACGGGCGGCACGCGCGGCATCGGCGCGGCGATCGTGCGGCGGCTGGCGGCG
GCCGGCTGGCGCGTGGCGGC

Product: putative acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKIFDPAILNLPFYDATHRALAADLEAWVEAHAWLPHEYERLDAAERGRLYTRLLGQDGWLRHAVDPAPGRERPDVRALC
LIREAFAYLDDLVDFAFSIQGLAAAPIAWYGSAAQRAAWLPGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADGYAVD
GLKTWVSNGDIADHHAVLLRTGEGPGGLGLSFLSVPAATAGVTPNGIALLAPRAFASLAFEQAALPADALIGTAGMGFRY
AMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTIDKIANMAAFADSTALLVARTAWEFDTGVAEVA
AHASITKLVATDGLARVADDAVQLFGAAGLVAGSPAESLFRQARALRIYEGTSEIQKIVIAGSVSRRRA

Sequences:

>Translated_389_residues
MKIFDPAILNLPFYDATHRALAADLEAWVEAHAWLPHEYERLDAAERGRLYTRLLGQDGWLRHAVDPAPGRERPDVRALC
LIREAFAYLDDLVDFAFSIQGLAAAPIAWYGSAAQRAAWLPGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADGYAVD
GLKTWVSNGDIADHHAVLLRTGEGPGGLGLSFLSVPAATAGVTPNGIALLAPRAFASLAFEQAALPADALIGTAGMGFRY
AMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTIDKIANMAAFADSTALLVARTAWEFDTGVAEVA
AHASITKLVATDGLARVADDAVQLFGAAGLVAGSPAESLFRQARALRIYEGTSEIQKIVIAGSVSRRRA
>Mature_389_residues
MKIFDPAILNLPFYDATHRALAADLEAWVEAHAWLPHEYERLDAAERGRLYTRLLGQDGWLRHAVDPAPGRERPDVRALC
LIREAFAYLDDLVDFAFSIQGLAAAPIAWYGSAAQRAAWLPGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADGYAVD
GLKTWVSNGDIADHHAVLLRTGEGPGGLGLSFLSVPAATAGVTPNGIALLAPRAFASLAFEQAALPADALIGTAGMGFRY
AMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTIDKIANMAAFADSTALLVARTAWEFDTGVAEVA
AHASITKLVATDGLARVADDAVQLFGAAGLVAGSPAESLFRQARALRIYEGTSEIQKIVIAGSVSRRRA

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=284, Percent_Identity=34.8591549295775, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI187960098, Length=308, Percent_Identity=31.8181818181818, Blast_Score=148, Evalue=7e-36,
Organism=Homo sapiens, GI4557231, Length=308, Percent_Identity=31.8181818181818, Blast_Score=148, Evalue=8e-36,
Organism=Homo sapiens, GI4557235, Length=292, Percent_Identity=27.0547945205479, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI76496475, Length=292, Percent_Identity=27.0547945205479, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4501859, Length=335, Percent_Identity=29.2537313432836, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI21361497, Length=292, Percent_Identity=28.0821917808219, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI7656849, Length=291, Percent_Identity=27.8350515463918, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI226958412, Length=275, Percent_Identity=28.7272727272727, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI226958414, Length=275, Percent_Identity=28.7272727272727, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4501857, Length=364, Percent_Identity=28.2967032967033, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI48976061, Length=283, Percent_Identity=30.7420494699647, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI211971008, Length=283, Percent_Identity=30.7420494699647, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI38505218, Length=301, Percent_Identity=26.2458471760797, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI4503943, Length=305, Percent_Identity=24.5901639344262, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI7669494, Length=208, Percent_Identity=27.8846153846154, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=278, Percent_Identity=26.2589928057554, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786223, Length=264, Percent_Identity=21.969696969697, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=308, Percent_Identity=34.4155844155844, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17570075, Length=329, Percent_Identity=31.6109422492401, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17569725, Length=307, Percent_Identity=32.5732899022801, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17533517, Length=288, Percent_Identity=29.1666666666667, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71985184, Length=292, Percent_Identity=30.8219178082192, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17551932, Length=301, Percent_Identity=28.5714285714286, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17538396, Length=289, Percent_Identity=27.3356401384083, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=306, Percent_Identity=27.4509803921569, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=383, Percent_Identity=27.9373368146214, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=283, Percent_Identity=28.2685512367491, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=239, Percent_Identity=30.5439330543933, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=206, Percent_Identity=28.1553398058252, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=313, Percent_Identity=25.2396166134185, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=286, Percent_Identity=24.8251748251748, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=286, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=187, Percent_Identity=26.7379679144385, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24660351, Length=313, Percent_Identity=31.9488817891374, Blast_Score=158, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24646207, Length=354, Percent_Identity=30.7909604519774, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI21356377, Length=288, Percent_Identity=31.25, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI281363737, Length=292, Percent_Identity=29.1095890410959, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI21355753, Length=358, Percent_Identity=26.2569832402235, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24666513, Length=337, Percent_Identity=26.4094955489614, Blast_Score=109, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41067; Mature: 41067

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFDPAILNLPFYDATHRALAADLEAWVEAHAWLPHEYERLDAAERGRLYTRLLGQDGW
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCHHHHHHHCCCCC
LRHAVDPAPGRERPDVRALCLIREAFAYLDDLVDFAFSIQGLAAAPIAWYGSAAQRAAWL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCHHHHHHHC
PGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADGYAVDGLKTWVSNGDIADHHAVLLR
CCCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEE
TGEGPGGLGLSFLSVPAATAGVTPNGIALLAPRAFASLAFEQAALPADALIGTAGMGFRY
ECCCCCCCCHHHHHCCCHHCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCHHHH
AMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTIDKIANMAAFADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
TALLVARTAWEFDTGVAEVAAHASITKLVATDGLARVADDAVQLFGAAGLVAGSPAESLF
CEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
RQARALRIYEGTSEIQKIVIAGSVSRRRA
HHHHHEEEECCHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MKIFDPAILNLPFYDATHRALAADLEAWVEAHAWLPHEYERLDAAERGRLYTRLLGQDGW
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCHHHHHHHCCCCC
LRHAVDPAPGRERPDVRALCLIREAFAYLDDLVDFAFSIQGLAAAPIAWYGSAAQRAAWL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCHHHHHHHC
PGLRDGTVIGSLALSEPEAGSNLAAVAVAAERTADGYAVDGLKTWVSNGDIADHHAVLLR
CCCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEE
TGEGPGGLGLSFLSVPAATAGVTPNGIALLAPRAFASLAFEQAALPADALIGTAGMGFRY
ECCCCCCCCHHHHHCCCHHCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCHHHH
AMEILNIYRASVGAAALGFARRALAASLEWARERPVAGGKLLQQQFTIDKIANMAAFADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
TALLVARTAWEFDTGVAEVAAHASITKLVATDGLARVADDAVQLFGAAGLVAGSPAESLF
CEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
RQARALRIYEGTSEIQKIVIAGSVSRRRA
HHHHHEEEECCHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]