| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fadD11 [H]
Identifier: 238027276
GI number: 238027276
Start: 1831314
End: 1832873
Strand: Direct
Name: fadD11 [H]
Synonym: bglu_1g16630
Alternate gene names: 238027276
Gene position: 1831314-1832873 (Clockwise)
Preceding gene: 238027275
Following gene: 238027277
Centisome position: 46.88
GC content: 70.71
Gene sequence:
>1560_bases ATGACGCGCCCGCCATCGGTGATCAACGCGGTGGCCGCGAACGGCGGCAAGCACGCCACGCAGCGCGTGACGTTCTTCCA GCAGGGCGGCCGCATCGACCTCACGCACGCACAGCTCGACGCGCTGGCCGCGCGGCTCGCGCTGCGCCTGCGCGAGGCGG GCCTGAAGCGCGGCGCGCGGATCGGCATCGTCGCGCGCAACGGGCTGGCCTGGGTGCTGCTCGACCTGGCCGCGCTGAAG GCCGGCTATGTCACGGCCGGCTTCGAGTTCGGCAAGTTCGAGGCCAACCGCGAGCTGGTCGAGCGCTATGCCCTCGACGC GATCCTGGCCGACGGCGGCGCGCCGTTCGCCGCGCGCGGCGTCCACGACCTGCGCGAGCTCGTCGAGGCGGTGGTGGCGC AGGCCGGCGACGGCCGCGAGGTCGATCCGGTCGCGCCGGCGTTCGACACGGCCGTCTATGGCGAGGACGACGTCACCACC ATCAAGTTCACCTCGGGCAGCTCGGGCGAGCCGAAGGGGCTGGCCGCGCGCGTCGGCAGCATCGACGCCTCGCTCGCGGC GGTCCAGCAGATCTACGCGCACGGCCCCGACGACGACCTGCTGGTGTTCCTGCCGCTGTCGCTGCTGCAACAGCGCTACT GGATCTACTCGGCGCTGGCGTATGGCCATGCCACCACCGTCACGCGCTTCGAGTACGCGCTCGAGATCGCGCGCCGGCAG CCGCCCACCGTGGTAATGGGCGTACCGGGCTTCTTCGACGGCGTGAAGAAGCGCATCGAACGGCTCACGCCGGCCGGCGA GACGGATCCGGCCGCACGGCGCCTGCGCATCGATGCGCTGCTGGGCGGCCGCATCCGCTACCTGTGGACCGGCTCGGCGC CGGCCAACCCGCAGACGCTGCGTTTCTTCGAGGAGGCCGGCGTGCCGATCTTCGAGGGCTACGGCATGAACGAGACCTGC ATCGTCAGCAAGAACTATCCGGGCCAGGCGCGCACCGGCAGCGTCGGGCGCCTGCTGCCCGGTAAGCGCGCGCGCATCGA CGAGCACGGCGTGCTGGTGGTGGGCGCCGAGCAGCCGGTGAACACGCGCTACCTCTACAGCGCGCCCGGCGCGAGCGAAA AGATCTTCCTGCCGACGGGCGAGGTCAGGACGGGCGACCTCGCGCGCATCGACGAGGACGGCTTCCTCTACATCCTCGGG CGCGCCGACGATCTGATCGTGCTGGCCAACGGCAAGAACGTCCACGTGCGCAGCCTGGAGGAGCGCGTGAAGGCGCACCA GGGCGTGGAGGAGTGCGTGCTGTTCGGTTCGGGCAAGCCGTTCCTGGTGGCGGTGGTGTCGCCGCAGGACGCGCGCGCCG ATCACGCCGCGATCCGCGCGCACCTGAGCGAGCTGAACGCGAGCCTCGCGCCCGACGAGCGGATCGTGCGCGCGTTCATC ACGCCCGAGCCGTTTCGCGGCCAGACGCGCTTCGTCACCTCGCAGTTCAAGCCGAAGCGCAACGAGATCTTCAACGCGTT CCGGCAGGAAATCGACCAACTCTATGGAGCTTCAGCGTGA
Upstream 100 bases:
>100_bases TCCAGGGCTTCGCGGCCGGCAGCTACCGCAACCTTGCCGCCGACCGCCTGCCCGAGCCGGCGGTGGCGCGCGCGGCCACC ATCGCGGAGGGCTCGGTCTG
Downstream 100 bases:
>100_bases GCGAAATTGAAACGATCGTGCGGCGCCACCTCGCCGAGGCGGCGGGCAAGGATGCCGCCGGGGCCGCGGCGCTGCCGCTC GACGCCGACCTCGTCTACGA
Product: AMP-dependent synthetase and ligase
Products: [acyl carrier protein]; L-1-phosphatidyl-ethanolamine; AMP; pyrophosphate; acyl-ACP [C]
Alternate protein names: Acyl-CoA synthetase [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTRPPSVINAVAANGGKHATQRVTFFQQGGRIDLTHAQLDALAARLALRLREAGLKRGARIGIVARNGLAWVLLDLAALK AGYVTAGFEFGKFEANRELVERYALDAILADGGAPFAARGVHDLRELVEAVVAQAGDGREVDPVAPAFDTAVYGEDDVTT IKFTSGSSGEPKGLAARVGSIDASLAAVQQIYAHGPDDDLLVFLPLSLLQQRYWIYSALAYGHATTVTRFEYALEIARRQ PPTVVMGVPGFFDGVKKRIERLTPAGETDPAARRLRIDALLGGRIRYLWTGSAPANPQTLRFFEEAGVPIFEGYGMNETC IVSKNYPGQARTGSVGRLLPGKRARIDEHGVLVVGAEQPVNTRYLYSAPGASEKIFLPTGEVRTGDLARIDEDGFLYILG RADDLIVLANGKNVHVRSLEERVKAHQGVEECVLFGSGKPFLVAVVSPQDARADHAAIRAHLSELNASLAPDERIVRAFI TPEPFRGQTRFVTSQFKPKRNEIFNAFRQEIDQLYGASA
Sequences:
>Translated_519_residues MTRPPSVINAVAANGGKHATQRVTFFQQGGRIDLTHAQLDALAARLALRLREAGLKRGARIGIVARNGLAWVLLDLAALK AGYVTAGFEFGKFEANRELVERYALDAILADGGAPFAARGVHDLRELVEAVVAQAGDGREVDPVAPAFDTAVYGEDDVTT IKFTSGSSGEPKGLAARVGSIDASLAAVQQIYAHGPDDDLLVFLPLSLLQQRYWIYSALAYGHATTVTRFEYALEIARRQ PPTVVMGVPGFFDGVKKRIERLTPAGETDPAARRLRIDALLGGRIRYLWTGSAPANPQTLRFFEEAGVPIFEGYGMNETC IVSKNYPGQARTGSVGRLLPGKRARIDEHGVLVVGAEQPVNTRYLYSAPGASEKIFLPTGEVRTGDLARIDEDGFLYILG RADDLIVLANGKNVHVRSLEERVKAHQGVEECVLFGSGKPFLVAVVSPQDARADHAAIRAHLSELNASLAPDERIVRAFI TPEPFRGQTRFVTSQFKPKRNEIFNAFRQEIDQLYGASA >Mature_518_residues TRPPSVINAVAANGGKHATQRVTFFQQGGRIDLTHAQLDALAARLALRLREAGLKRGARIGIVARNGLAWVLLDLAALKA GYVTAGFEFGKFEANRELVERYALDAILADGGAPFAARGVHDLRELVEAVVAQAGDGREVDPVAPAFDTAVYGEDDVTTI KFTSGSSGEPKGLAARVGSIDASLAAVQQIYAHGPDDDLLVFLPLSLLQQRYWIYSALAYGHATTVTRFEYALEIARRQP PTVVMGVPGFFDGVKKRIERLTPAGETDPAARRLRIDALLGGRIRYLWTGSAPANPQTLRFFEEAGVPIFEGYGMNETCI VSKNYPGQARTGSVGRLLPGKRARIDEHGVLVVGAEQPVNTRYLYSAPGASEKIFLPTGEVRTGDLARIDEDGFLYILGR ADDLIVLANGKNVHVRSLEERVKAHQGVEECVLFGSGKPFLVAVVSPQDARADHAAIRAHLSELNASLAPDERIVRAFIT PEPFRGQTRFVTSQFKPKRNEIFNAFRQEIDQLYGASA
Specific function: Plays A Role In Lysophospholipid Acylation. Transfers Fatty Acids To The 1-Position VIa An Enzyme-Bound Acyl-Acp Intermediate In The Presence Of ATP And Mg(2+). Its Physiological Function Is To Regenerate Ptdetn From 2-Acyl-Gpe Formed By Transacylation R
COG id: COG1022
COG function: function code I; Long-chain acyl-CoA synthetases (AMP-forming)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI40807491, Length=592, Percent_Identity=23.1418918918919, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI57165412, Length=433, Percent_Identity=25.635103926097, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI57165410, Length=433, Percent_Identity=24.9422632794457, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI27477105, Length=507, Percent_Identity=23.8658777120316, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI42794754, Length=444, Percent_Identity=23.1981981981982, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI42794752, Length=444, Percent_Identity=23.1981981981982, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI38505220, Length=447, Percent_Identity=23.7136465324385, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789201, Length=287, Percent_Identity=30.3135888501742, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788107, Length=148, Percent_Identity=34.4594594594595, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25147511, Length=592, Percent_Identity=25.1689189189189, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17558820, Length=319, Percent_Identity=27.2727272727273, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI32563687, Length=318, Percent_Identity=28.6163522012579, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17541856, Length=429, Percent_Identity=25.6410256410256, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17556552, Length=577, Percent_Identity=21.8370883882149, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17510401, Length=604, Percent_Identity=21.523178807947, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193204819, Length=277, Percent_Identity=25.9927797833935, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324893, Length=444, Percent_Identity=24.5495495495495, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6322182, Length=445, Percent_Identity=24.0449438202247, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI62471679, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI62471683, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI62471685, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24586636, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI62471681, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI62471687, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24586634, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI22026970, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI62471689, Length=442, Percent_Identity=23.3031674208145, Blast_Score=96, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: NA
Molecular weight: Translated: 56326; Mature: 56195
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPPSVINAVAANGGKHATQRVTFFQQGGRIDLTHAQLDALAARLALRLREAGLKRGAR CCCCCHHHHHHHCCCCCHHHHEEHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCE IGIVARNGLAWVLLDLAALKAGYVTAGFEFGKFEANRELVERYALDAILADGGAPFAARG EEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHCC VHDLRELVEAVVAQAGDGREVDPVAPAFDTAVYGEDDVTTIKFTSGSSGEPKGLAARVGS HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHCC IDASLAAVQQIYAHGPDDDLLVFLPLSLLQQRYWIYSALAYGHATTVTRFEYALEIARRQ CHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PPTVVMGVPGFFDGVKKRIERLTPAGETDPAARRLRIDALLGGRIRYLWTGSAPANPQTL CCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCEEEEEEECCCCCCCHHH RFFEEAGVPIFEGYGMNETCIVSKNYPGQARTGSVGRLLPGKRARIDEHGVLVVGAEQPV HHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC NTRYLYSAPGASEKIFLPTGEVRTGDLARIDEDGFLYILGRADDLIVLANGKNVHVRSLE CCEEEEECCCCCCEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEECCCEEEHHHHH ERVKAHQGVEECVLFGSGKPFLVAVVSPQDARADHAAIRAHLSELNASLAPDERIVRAFI HHHHHHCCHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHEEEE TPEPFRGQTRFVTSQFKPKRNEIFNAFRQEIDQLYGASA CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TRPPSVINAVAANGGKHATQRVTFFQQGGRIDLTHAQLDALAARLALRLREAGLKRGAR CCCCHHHHHHHCCCCCHHHHEEHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCE IGIVARNGLAWVLLDLAALKAGYVTAGFEFGKFEANRELVERYALDAILADGGAPFAARG EEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHCC VHDLRELVEAVVAQAGDGREVDPVAPAFDTAVYGEDDVTTIKFTSGSSGEPKGLAARVGS HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHCC IDASLAAVQQIYAHGPDDDLLVFLPLSLLQQRYWIYSALAYGHATTVTRFEYALEIARRQ CHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PPTVVMGVPGFFDGVKKRIERLTPAGETDPAARRLRIDALLGGRIRYLWTGSAPANPQTL CCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCEEEEEEECCCCCCCHHH RFFEEAGVPIFEGYGMNETCIVSKNYPGQARTGSVGRLLPGKRARIDEHGVLVVGAEQPV HHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC NTRYLYSAPGASEKIFLPTGEVRTGDLARIDEDGFLYILGRADDLIVLANGKNVHVRSLE CCEEEEECCCCCCEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEEEECCCEEEHHHHH ERVKAHQGVEECVLFGSGKPFLVAVVSPQDARADHAAIRAHLSELNASLAPDERIVRAFI HHHHHHCCHHHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHEEEE TPEPFRGQTRFVTSQFKPKRNEIFNAFRQEIDQLYGASA CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-ACP; 2-acyl-sn-glycero-3-phosphoethanolamine; ATP; a fatty acid [C]
Specific reaction: acyl-ACP + 2-acyl-sn-glycero-3-phosphoethanolamine = [acyl carrier protein] + L-1-phosphatidyl-ethanolamine ATP + a fatty acid + [acyl carrier protein] = AMP + pyrophosphate + acyl-ACP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]