| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027265
Identifier: 238027265
GI number: 238027265
Start: 1813408
End: 1814394
Strand: Reverse
Name: 238027265
Synonym: bglu_1g16520
Alternate gene names: NA
Gene position: 1814394-1813408 (Counterclockwise)
Preceding gene: 238027267
Following gene: 238027264
Centisome position: 46.45
GC content: 73.76
Gene sequence:
>987_bases ATGTCCACCCCAGCCGCACTGCCATGCGCGTCCGCCGAGCCGGCCCCCGACCACGACGCGCCGTTCGTGTTCGTCGTCAA TGCCGGCTCGGGCCGGCGGCGCGAACTCGACACGCTGGTGGCCCAGCTCGACGCCGCGTTCGGCCGCAGCGGCCGCCGCT ACGAACTCGTGAGCGTGGCCGATCCGTCGCAGCTGGAAGCGAGCGCCGCGCGCGCGGCCGGCCTCGCGCGCGGCGGCGTG CTGGTGGGCGTGGGCGGCGACGGCACGCTGCGCACGGTGGCGCGCGCCGCGCTCGACGCGGGCTGCGTGTTCGGCGTGCT GCCGCGCGGCACCTTCAATTACTTCAGCCGCGACCACGGCATTCCCGCCGATCCGGAACAGGCCATCGCGCTGCTGCTCA GCGCGCGCGTGCATCCGGTGCAGGTGGGCTTCGTCAACGATGCGCTGTTCCTCGTCAACGCGAGCCTCGGGCTCTATCCG AAGCTGCTCGAACAGCGCGAGGCCTACAAGCGCCAGTTCGGCCGCAGCCGGCTGGTGGCGCTAGGCTCGGCGATCGCCAC GCTGCTGCGCCCGCACCGGCTGCTGCGGCTGCATGTCGATCACGAGGGCACCGCGCGCGAGTTGCGCACCACCACGCTGT TCGTCGCCAACAACCGGCTCCAGCTCGAACAAGTGGGCGCGGCCGAGGCGCCGCTGCTCGCGCAGGGCATGCTGGTGGCG CTGGCGCCGCTCGCGCATGGGCGGCTCGCGCAGATCCTGCTGTCGCTGCGCGGCGCGTTCAGCCGGGTCCGCGACGCGGG CGACGTGGTCGGCTTCGGCTTCACGCGCTTCACCGTCACGCGCGCCTCGCGGCGGCGCCGCCGCATCAAGGTCGCCACCG ACGGCGAGATCGCCTGGCTCGACCTGCCGCTCGAGTTTCGCCTGGCCGACCGGCCGCTGCGCCTGCTCAAGCCCGAGCCC GACGTCGCCGAGCGCAACCGCGCATGA
Upstream 100 bases:
>100_bases ACGGGCTTGGCGATGCGGGCCTTCAGCGGCGGCACGCTCGCCCGGTCGCTCGCAACTGAAATACAATCGTAAGCCACCAC CTGCCCCGAGGGCCCTCCCG
Downstream 100 bases:
>100_bases GCACGCTGCTGCAGGTTTCCGATCCGCATTTCGGCGCCGAATGGCCGGCCGCCGTCGATGCGCTGGTGGCGCTCGTGACC ACGCTGCGCCCGGACCTCGT
Product: diacylglycerol kinase
Products: NA
Alternate protein names: Sphingosine Kinase; Diacylglycerol Kinase; Diacylglycerol Kinase Catalytic Domain-Containing Protein; Sphingosine Kinase And Related Diacylglycerol Kinase; Related Diacylglycerol Kinase; Diacylglycerol Kinase-Like Protein; Sphingosine Kinase/Eukaryotic Diacylglycerol Kinase
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSTPAALPCASAEPAPDHDAPFVFVVNAGSGRRRELDTLVAQLDAAFGRSGRRYELVSVADPSQLEASAARAAGLARGGV LVGVGGDGTLRTVARAALDAGCVFGVLPRGTFNYFSRDHGIPADPEQAIALLLSARVHPVQVGFVNDALFLVNASLGLYP KLLEQREAYKRQFGRSRLVALGSAIATLLRPHRLLRLHVDHEGTARELRTTTLFVANNRLQLEQVGAAEAPLLAQGMLVA LAPLAHGRLAQILLSLRGAFSRVRDAGDVVGFGFTRFTVTRASRRRRRIKVATDGEIAWLDLPLEFRLADRPLRLLKPEP DVAERNRA
Sequences:
>Translated_328_residues MSTPAALPCASAEPAPDHDAPFVFVVNAGSGRRRELDTLVAQLDAAFGRSGRRYELVSVADPSQLEASAARAAGLARGGV LVGVGGDGTLRTVARAALDAGCVFGVLPRGTFNYFSRDHGIPADPEQAIALLLSARVHPVQVGFVNDALFLVNASLGLYP KLLEQREAYKRQFGRSRLVALGSAIATLLRPHRLLRLHVDHEGTARELRTTTLFVANNRLQLEQVGAAEAPLLAQGMLVA LAPLAHGRLAQILLSLRGAFSRVRDAGDVVGFGFTRFTVTRASRRRRRIKVATDGEIAWLDLPLEFRLADRPLRLLKPEP DVAERNRA >Mature_327_residues STPAALPCASAEPAPDHDAPFVFVVNAGSGRRRELDTLVAQLDAAFGRSGRRYELVSVADPSQLEASAARAAGLARGGVL VGVGGDGTLRTVARAALDAGCVFGVLPRGTFNYFSRDHGIPADPEQAIALLLSARVHPVQVGFVNDALFLVNASLGLYPK LLEQREAYKRQFGRSRLVALGSAIATLLRPHRLLRLHVDHEGTARELRTTTLFVANNRLQLEQVGAAEAPLLAQGMLVAL APLAHGRLAQILLSLRGAFSRVRDAGDVVGFGFTRFTVTRASRRRRRIKVATDGEIAWLDLPLEFRLADRPLRLLKPEPD VAERNRA
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35394; Mature: 35263
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPAALPCASAEPAPDHDAPFVFVVNAGSGRRRELDTLVAQLDAAFGRSGRRYELVSVA CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEC DPSQLEASAARAAGLARGGVLVGVGGDGTLRTVARAALDAGCVFGVLPRGTFNYFSRDHG CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHCCCC IPADPEQAIALLLSARVHPVQVGFVNDALFLVNASLGLYPKLLEQREAYKRQFGRSRLVA CCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH LGSAIATLLRPHRLLRLHVDHEGTARELRTTTLFVANNRLQLEQVGAAEAPLLAQGMLVA HHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEEEEECCEEEHHHCCCCCCCHHHHHHHHH LAPLAHGRLAQILLSLRGAFSRVRDAGDVVGFGFTRFTVTRASRRRRRIKVATDGEIAWL HHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHEEHHHHHHHCEEEEEECCCEEEE DLPLEFRLADRPLRLLKPEPDVAERNRA ECCEEEEECCCCHHHCCCCCCHHHCCCC >Mature Secondary Structure STPAALPCASAEPAPDHDAPFVFVVNAGSGRRRELDTLVAQLDAAFGRSGRRYELVSVA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEC DPSQLEASAARAAGLARGGVLVGVGGDGTLRTVARAALDAGCVFGVLPRGTFNYFSRDHG CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHCCCC IPADPEQAIALLLSARVHPVQVGFVNDALFLVNASLGLYPKLLEQREAYKRQFGRSRLVA CCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH LGSAIATLLRPHRLLRLHVDHEGTARELRTTTLFVANNRLQLEQVGAAEAPLLAQGMLVA HHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEEEEECCEEEHHHCCCCCCCHHHHHHHHH LAPLAHGRLAQILLSLRGAFSRVRDAGDVVGFGFTRFTVTRASRRRRRIKVATDGEIAWL HHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHEEHHHHHHHCEEEEEECCCEEEE DLPLEFRLADRPLRLLKPEPDVAERNRA ECCEEEEECCCCHHHCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA