Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027213

Identifier: 238027213

GI number: 238027213

Start: 1749580

End: 1750125

Strand: Direct

Name: 238027213

Synonym: bglu_1g15990

Alternate gene names: NA

Gene position: 1749580-1750125 (Clockwise)

Preceding gene: 238027212

Following gene: 238027216

Centisome position: 44.79

GC content: 71.25

Gene sequence:

>546_bases
ATGAGCCTGCGCAACCCGTCCCTCTCCATTTGCCTCGCCGCGCTCGCGGCGGCCTCGAGCGGCGCCTCCGCGCTCGCGGC
GCCACCGGTCAAGACCAGCGCCGGCGGCAACGACGGCCAGCTCCAGTACACGGTGAAGGTCGATTCGAAGCGCTACGGCG
CCTCCCAGGAAACCCGCAAGATCCGCTCGGGCGAGATCGACGATTTCAACTGGAAATCGGTGCCGCCTTCGGGCGCGGTC
GCGATGCCGGACGGCTGTCCCGATGCCGATTCGGCGCCGCGCGACGCGAACGGCGCGATGGTGCGCCAGACCCAGGTGCG
GCTCGCGCCTGCGGTCGACGCGAAGGGCGTGGCGACGGTGCAGGTCAGCTTCCAGGCCCGCGCCCCGGACGGCACCGCGT
CGGTCACGACCGGCGGCAAGACGCTGCAGTGCCCGAAGGCGGTCACCGTCAGCGAGGTGCGGCGCGTGTCGATCCCGATC
AAGGGCGGTGCGAAGACGCTCGTGCTGCGCGACGGCACGCGCGTCACGATCTCGATCCATCCCTGA

Upstream 100 bases:

>100_bases
CACCGGTGCGGCTGCCAGCGACTAGACTGAATCACGCGTGCATCGTGTCTTGCCATAAAACCAGGCGCCCGCAGCGGCGC
TGCCATACCAGGAGGACAGC

Downstream 100 bases:

>100_bases
GCCGAGGCGCCGCGGGCCCGGCCGGTCCGGCGCGCGCCATGGGTGAAGCCTCGGCGCGCCAAGCGATGCGGCCGGCGCGG
CCCTGGCCGGTTCAGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSLRNPSLSICLAALAAASSGASALAAPPVKTSAGGNDGQLQYTVKVDSKRYGASQETRKIRSGEIDDFNWKSVPPSGAV
AMPDGCPDADSAPRDANGAMVRQTQVRLAPAVDAKGVATVQVSFQARAPDGTASVTTGGKTLQCPKAVTVSEVRRVSIPI
KGGAKTLVLRDGTRVTISIHP

Sequences:

>Translated_181_residues
MSLRNPSLSICLAALAAASSGASALAAPPVKTSAGGNDGQLQYTVKVDSKRYGASQETRKIRSGEIDDFNWKSVPPSGAV
AMPDGCPDADSAPRDANGAMVRQTQVRLAPAVDAKGVATVQVSFQARAPDGTASVTTGGKTLQCPKAVTVSEVRRVSIPI
KGGAKTLVLRDGTRVTISIHP
>Mature_180_residues
SLRNPSLSICLAALAAASSGASALAAPPVKTSAGGNDGQLQYTVKVDSKRYGASQETRKIRSGEIDDFNWKSVPPSGAVA
MPDGCPDADSAPRDANGAMVRQTQVRLAPAVDAKGVATVQVSFQARAPDGTASVTTGGKTLQCPKAVTVSEVRRVSIPIK
GGAKTLVLRDGTRVTISIHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18569; Mature: 18438

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRNPSLSICLAALAAASSGASALAAPPVKTSAGGNDGQLQYTVKVDSKRYGASQETRK
CCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHH
IRSGEIDDFNWKSVPPSGAVAMPDGCPDADSAPRDANGAMVRQTQVRLAPAVDAKGVATV
HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEE
QVSFQARAPDGTASVTTGGKTLQCPKAVTVSEVRRVSIPIKGGAKTLVLRDGTRVTISIH
EEEEEEECCCCCEEEECCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEC
P
C
>Mature Secondary Structure 
SLRNPSLSICLAALAAASSGASALAAPPVKTSAGGNDGQLQYTVKVDSKRYGASQETRK
CCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHH
IRSGEIDDFNWKSVPPSGAVAMPDGCPDADSAPRDANGAMVRQTQVRLAPAVDAKGVATV
HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEE
QVSFQARAPDGTASVTTGGKTLQCPKAVTVSEVRRVSIPIKGGAKTLVLRDGTRVTISIH
EEEEEEECCCCCEEEECCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA