| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is qor [C]
Identifier: 238027212
GI number: 238027212
Start: 1748132
End: 1749148
Strand: Direct
Name: qor [C]
Synonym: bglu_1g15980
Alternate gene names: 238027212
Gene position: 1748132-1749148 (Clockwise)
Preceding gene: 238027209
Following gene: 238027213
Centisome position: 44.75
GC content: 70.5
Gene sequence:
>1017_bases ATGAAAGCCGTAGGTCTGACCCGCTACCTGCCGATCGACCATCCCGAGGCGCTGCTCGACGTCGAGTTGCCGACGCCCGA GCCCGCAGGACGCGACCTGCTCGTCAAGATCGAGGCGATTTCGGTCAACCCGGTCGACACCAAGGTGCGCGCGCCGCAGG ACAAGGTCGAGGACAGCCCGCGCGTGCTGGGCTGGGACGCGGCCGGCACGGTGGCCGCCGTCGGCCCGGACGTGACGCTG TTTCGCGTCGGCGATCCGGTCTACTACGCCGGCAGCATCACGCGCGCCGGCGCCAACAGCGAGTTCCATCTGGTGGACGA GCGGATCGCGGCGCTCAAGCCCGCGTCGCTCGATTTCGCCGCGGCGGCGGCGCTGCCGCTCACGTCGATCACCGCCTGGG AGGCGCTGTTCGACCGCCTCAAGGTGTCGCCGCAGGGGCGCGACGCGGGCCAGTCGGTGCTCGTGATCGGCGGCGCGGGC GGGGTCGGCTCGATCGGCATCCAGCTCGCGAAGCAACTCGGACAGCTGACGGTGATCGCCACGGCGTCGCGGCCGGAATC GGCGCAATGGGTGCGCCGGCTCGGCGCCGACCAGGTGGTCGATCACTTCGGCGATCTGCCCGCGCAGGTCCGCGCCGCCG GCTTCGAGGCGGTCGACTACGTGCTGGTGTTCAACGACACCGACCGTCATTTCCCGGCCGCGGCCGAGCTCGTCAAGCCG CAGGGCGGGATCTGCACCATCGTCGAGAATGCGCGGCCGGTGCCCGTCGAGCAGCTGAAGGCAAAGAGCGCCGCATTCCA CTGGGAGTTCATGTTCACGCGCTCGATGTTCGGCACGCCGGACATGATCGAGCAGCACAAGCTGCTGACCGAGGTCGCGC GGCTGGTGGACGCCGGCACGCTGCGCGGCACGGTGGGCCAGCACCTCGGCACGATCAACGCGGCCAACCTGCGCGAGGCG CACCGCCTGCTCGAAGCCGGCCGCGCGATCGGCAAGCTCGTGCTGAGCGGGTTCTGA
Upstream 100 bases:
>100_bases CCAAAAAATGTTTCCGGGATTATGTCGCTTTTTCTTCAGGATCGGGCCGCTTACGATCGGACCCGTCACCAACCCCGATT GCCCCCGAAGGAGCCAAGCC
Downstream 100 bases:
>100_bases CGCGCCGCATGGGGCCGGTGCCGATGAGGGCGCGATTGCCTGCCGGAGCCGGGCCGGCAGGCAATCGGCACGGCCGGCAA CCACGGCTGCCGCGGGCCAG
Product: NADPH:quinone reductase and related Zn-dependent oxidoreductase
Products: NADP(+); Semiquinone. [C]
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKAVGLTRYLPIDHPEALLDVELPTPEPAGRDLLVKIEAISVNPVDTKVRAPQDKVEDSPRVLGWDAAGTVAAVGPDVTL FRVGDPVYYAGSITRAGANSEFHLVDERIAALKPASLDFAAAAALPLTSITAWEALFDRLKVSPQGRDAGQSVLVIGGAG GVGSIGIQLAKQLGQLTVIATASRPESAQWVRRLGADQVVDHFGDLPAQVRAAGFEAVDYVLVFNDTDRHFPAAAELVKP QGGICTIVENARPVPVEQLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGTLRGTVGQHLGTINAANLREA HRLLEAGRAIGKLVLSGF
Sequences:
>Translated_338_residues MKAVGLTRYLPIDHPEALLDVELPTPEPAGRDLLVKIEAISVNPVDTKVRAPQDKVEDSPRVLGWDAAGTVAAVGPDVTL FRVGDPVYYAGSITRAGANSEFHLVDERIAALKPASLDFAAAAALPLTSITAWEALFDRLKVSPQGRDAGQSVLVIGGAG GVGSIGIQLAKQLGQLTVIATASRPESAQWVRRLGADQVVDHFGDLPAQVRAAGFEAVDYVLVFNDTDRHFPAAAELVKP QGGICTIVENARPVPVEQLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGTLRGTVGQHLGTINAANLREA HRLLEAGRAIGKLVLSGF >Mature_338_residues MKAVGLTRYLPIDHPEALLDVELPTPEPAGRDLLVKIEAISVNPVDTKVRAPQDKVEDSPRVLGWDAAGTVAAVGPDVTL FRVGDPVYYAGSITRAGANSEFHLVDERIAALKPASLDFAAAAALPLTSITAWEALFDRLKVSPQGRDAGQSVLVIGGAG GVGSIGIQLAKQLGQLTVIATASRPESAQWVRRLGADQVVDHFGDLPAQVRAAGFEAVDYVLVFNDTDRHFPAAAELVKP QGGICTIVENARPVPVEQLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGTLRGTVGQHLGTINAANLREA HRLLEAGRAIGKLVLSGF
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=339, Percent_Identity=28.9085545722714, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI194239674, Length=204, Percent_Identity=33.8235294117647, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI13236495, Length=204, Percent_Identity=33.8235294117647, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI194239676, Length=204, Percent_Identity=33.8235294117647, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI24308257, Length=327, Percent_Identity=25.9938837920489, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI18379349, Length=247, Percent_Identity=29.9595141700405, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1790485, Length=188, Percent_Identity=35.1063829787234, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71987554, Length=182, Percent_Identity=34.6153846153846, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17507255, Length=189, Percent_Identity=34.3915343915344, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319945, Length=238, Percent_Identity=28.9915966386555, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324195, Length=227, Percent_Identity=27.7533039647577, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR014182 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: 1.6.5.5 [C]
Molecular weight: Translated: 36026; Mature: 36026
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVGLTRYLPIDHPEALLDVELPTPEPAGRDLLVKIEAISVNPVDTKVRAPQDKVEDSP CCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCC RVLGWDAAGTVAAVGPDVTLFRVGDPVYYAGSITRAGANSEFHLVDERIAALKPASLDFA CEEEECCCCCEEECCCCEEEEEECCCEEEECCEEECCCCCCEEEHHHHHHHCCCCCCCHH AAAALPLTSITAWEALFDRLKVSPQGRDAGQSVLVIGGAGGVGSIGIQLAKQLGQLTVIA HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEE TASRPESAQWVRRLGADQVVDHFGDLPAQVRAAGFEAVDYVLVFNDTDRHFPAAAELVKP ECCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHCC QGGICTIVENARPVPVEQLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGT CCCEEEEECCCCCCCHHHHHHHHHEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCC LRGTVGQHLGTINAANLREAHRLLEAGRAIGKLVLSGF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAVGLTRYLPIDHPEALLDVELPTPEPAGRDLLVKIEAISVNPVDTKVRAPQDKVEDSP CCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCC RVLGWDAAGTVAAVGPDVTLFRVGDPVYYAGSITRAGANSEFHLVDERIAALKPASLDFA CEEEECCCCCEEECCCCEEEEEECCCEEEECCEEECCCCCCEEEHHHHHHHCCCCCCCHH AAAALPLTSITAWEALFDRLKVSPQGRDAGQSVLVIGGAGGVGSIGIQLAKQLGQLTVIA HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEE TASRPESAQWVRRLGADQVVDHFGDLPAQVRAAGFEAVDYVLVFNDTDRHFPAAAELVKP ECCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHCC QGGICTIVENARPVPVEQLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGT CCCEEEEECCCCCCCHHHHHHHHHEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCC LRGTVGQHLGTINAANLREAHRLLEAGRAIGKLVLSGF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.017 {9,10-phenanthrenequinone}} 0.0153 {2,6-dichlorophenolindophenol}} 0.013 {2,6-dichlorophenolindophenol}} 0.26 {1,4-naphthoquinone}} 0.065 {1,4-benzoquinone}} 0.007 {NADPH}} 0.0069 {NADPH}} 0.0024 {1,2-naphthoquinone}} [C]
Substrates: NADPH; Quinone [C]
Specific reaction: NADPH + Quinone = NADP(+) + Semiquinone. [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: 2, 3-Dimercaptopropanol; 2, 5-Dichloro-3, 6-dihydroxy -1, 4-benzoquinone; 4-Hydroxy coumarin; 5, 5'-Dithiobis (2-nitrobenzoate); ADP; Cibacronblue3GA; Coumarin; Cu2+; Dicoumarol warfarin, coumarin; Dithiothreitol preincubation with 9, 10-phenanthrenequino
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]