Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027208

Identifier: 238027208

GI number: 238027208

Start: 1743950

End: 1744567

Strand: Direct

Name: 238027208

Synonym: bglu_1g15940

Alternate gene names: NA

Gene position: 1743950-1744567 (Clockwise)

Preceding gene: 238027207

Following gene: 238027209

Centisome position: 44.64

GC content: 75.57

Gene sequence:

>618_bases
GTGGCAGCCAGCCGAACCCGAATCCGCATCCGAGTCGCGACGGCGCTCGCGTTGGCCCTCGCCGCCGGCACGCTGCAGGC
GAAGCAGAATGCGCCTGCGGCGAAGCCGCCCGCGCAGCCGCCCGCGGCCGCCACCTCCGGCGCCTCCACCACCGAAGCGG
CCGCCGCGGCGGCCGCGGCACCGCCGGAGCGCGACGACACCGCGCCGGCCACGCCGCTGAAGCCGGATCCGGCGCTCGAG
AAGCTGCCGCGCTACACGGGCACGCTCGGCGGCCGGGCGATCGTCGCGCATCTCGGGCCGAAGGCGGGCGAGTCGGGCCT
GCACGGCGAATACCGCTACAGCGACACGGGCCAGGTGATCCTGCTGGCCGGCGATCGTGACGGCGACACGCTCGAACTCG
AGGAATCGAACGACGGCACCAACATCACGGGCCTTTGGACCGGCCGCCTCGATGCCTCGGGCGCGCTGTCGGCGGACCGC
ACCAATGCCGACGAGTCGGACCCGCAGCCGGTCGTGCTGCACCTGGCCACGGCGCCGGCACCGGCGCCGCGTTCGGGCAC
CACGGCGCCCGCCGGGCACGCGGTCGGCGGCGTCGGCAACCTCGGCACCACGGATTGA

Upstream 100 bases:

>100_bases
CATCGGCGGCGGCCAGGGCATTGCCGCCGTGTTCGAACGTATCTGACGACATCCGGGCGGCCGCTTCGGGCCGCCCACGC
AACCCAAGGAGTGACAAGAC

Downstream 100 bases:

>100_bases
GTCAGGGCGCGGGCGGCCCTGGCGCCCGCGATCGCGGCACGGTTCGCGCCGCCCCGGCGGCCCACCGAGCCGGCGCGGCT
GCGCTCGACTGTATCGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALE
KLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADR
TNADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD

Sequences:

>Translated_205_residues
MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALE
KLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADR
TNADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD
>Mature_204_residues
AASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAAPPERDDTAPATPLKPDPALEK
LPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVILLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRT
NADESDPQPVVLHLATAPAPAPRSGTTAPAGHAVGGVGNLGTTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20432; Mature: 20301

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAA
CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PPERDDTAPATPLKPDPALEKLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVI
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE
LLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRTNADESDPQPVVLHLATAPA
EEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PAPRSGTTAPAGHAVGGVGNLGTTD
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AASRTRIRIRVATALALALAAGTLQAKQNAPAAKPPAQPPAAATSGASTTEAAAAAAAA
CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PPERDDTAPATPLKPDPALEKLPRYTGTLGGRAIVAHLGPKAGESGLHGEYRYSDTGQVI
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE
LLAGDRDGDTLELEESNDGTNITGLWTGRLDASGALSADRTNADESDPQPVVLHLATAPA
EEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PAPRSGTTAPAGHAVGGVGNLGTTD
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA