Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is kdgK [H]

Identifier: 238027206

GI number: 238027206

Start: 1741635

End: 1742585

Strand: Direct

Name: kdgK [H]

Synonym: bglu_1g15920

Alternate gene names: 238027206

Gene position: 1741635-1742585 (Clockwise)

Preceding gene: 238027205

Following gene: 238027207

Centisome position: 44.58

GC content: 74.03

Gene sequence:

>951_bases
ATGACACGGACCATACCGGCGTCGGGCCAGCCGGCGCGGCCCGAGATCCTCGCGTTCGGCGAGGCGATGGTCGAATTCAA
CCAGTCCCAGCCGGGCTCGCCGCAGTATCTGCAAGGCTTCGGCGGCGACACCTCGAACTTCTGCATCGCGGCGGCGCGCC
AGGGGGCCCGCACCGGCTTCGTCTCGGCGGTCGGCGGCGACCACTTCGGCCGCCTGCTGCTCGATCTGTGGCGGCGCGAG
CAGGTGGATACGGCGACGGTCCGCGTCGACGCGGCGGCCCCCACCGGCGTCTATTTCGTCTCGCACGGCGAGCACGGCCA
CGCGTTCGACTATCTGCGTGCCGGCTCGGCCGCGAGCCGCTACGCGCCGGGCGATCTGCCGCTCGAGGCGCTGGCCGCGG
CGCGCGTGCTGCATCTGTCCGGCATCAGTTTCGCGATCAGCGCGAGCGCCTGCGACGCGGCGTTCGCGGCCATCGACCAG
GCACGCGCGCATGGCGTGCAGGTGAGCTTCGACACCAATCTGCGCCTGAAGCTGTGGCCGCTCGCGCGCGCCCGCGCCGT
GATGCTGGAGGCGCTGCGCCGCACCGACATCTGCCTGCCGAGCTGGGACGACGTGACGGTGCTGACGGGCCTCGACGAGC
GCGATGCGATCGTCGACGCGCTGCTCGACTGCGGCCCGCGGGTGGTCGCGCTGAAGCTCGGCAGGGACGGCGCCTACGTG
GCCACCCGCGACGCGCGCCGCCTGGTGCCCGCTTTCGTCGTCGAGGCGCTCGACGCGACGGGGGCGGGCGACTGCTTCGG
CGGCGCCTTCATCGCGCGCCTGGTGGCCGGCGACGACGCGTTCGTGGCGGCGCGCTACGCGAACGCGGCGGCGGCGCTCT
CGACGCGCGGCTACGGCGCGGTCGCGCCGATTCCCGACGCGCGGGCGGTGCGCGCCTTGCTGGACGGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCGAAGGGCGCGAAGCGCTACAAGGTCGGCGATTTCGTATCGGTGGCGATCACCGGGGCGGACGGCCACGACCTG
TGGGGCGAGGTCGAAGCGGC

Downstream 100 bases:

>100_bases
GCCGGCGGCCGCGCGGCAGCCAGCCGGCGGCGGGCCCGGCCCGGTGGAAGGATTCTTCGGTTGCCGCCGGGCGCTTCCGT
ATTACTCTGCGGGTCATTCG

Product: PfkB family kinase

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTRTIPASGQPARPEILAFGEAMVEFNQSQPGSPQYLQGFGGDTSNFCIAAARQGARTGFVSAVGGDHFGRLLLDLWRRE
QVDTATVRVDAAAPTGVYFVSHGEHGHAFDYLRAGSAASRYAPGDLPLEALAAARVLHLSGISFAISASACDAAFAAIDQ
ARAHGVQVSFDTNLRLKLWPLARARAVMLEALRRTDICLPSWDDVTVLTGLDERDAIVDALLDCGPRVVALKLGRDGAYV
ATRDARRLVPAFVVEALDATGAGDCFGGAFIARLVAGDDAFVAARYANAAAALSTRGYGAVAPIPDARAVRALLDG

Sequences:

>Translated_316_residues
MTRTIPASGQPARPEILAFGEAMVEFNQSQPGSPQYLQGFGGDTSNFCIAAARQGARTGFVSAVGGDHFGRLLLDLWRRE
QVDTATVRVDAAAPTGVYFVSHGEHGHAFDYLRAGSAASRYAPGDLPLEALAAARVLHLSGISFAISASACDAAFAAIDQ
ARAHGVQVSFDTNLRLKLWPLARARAVMLEALRRTDICLPSWDDVTVLTGLDERDAIVDALLDCGPRVVALKLGRDGAYV
ATRDARRLVPAFVVEALDATGAGDCFGGAFIARLVAGDDAFVAARYANAAAALSTRGYGAVAPIPDARAVRALLDG
>Mature_315_residues
TRTIPASGQPARPEILAFGEAMVEFNQSQPGSPQYLQGFGGDTSNFCIAAARQGARTGFVSAVGGDHFGRLLLDLWRREQ
VDTATVRVDAAAPTGVYFVSHGEHGHAFDYLRAGSAASRYAPGDLPLEALAAARVLHLSGISFAISASACDAAFAAIDQA
RAHGVQVSFDTNLRLKLWPLARARAVMLEALRRTDICLPSWDDVTVLTGLDERDAIVDALLDCGPRVVALKLGRDGAYVA
TRDARRLVPAFVVEALDATGAGDCFGGAFIARLVAGDDAFVAARYANAAAALSTRGYGAVAPIPDARAVRALLDG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=268, Percent_Identity=27.6119402985075, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081971, Length=280, Percent_Identity=31.0714285714286, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI87082281, Length=304, Percent_Identity=31.25, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1790193, Length=246, Percent_Identity=27.6422764227642, Blast_Score=71, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17532905, Length=304, Percent_Identity=26.9736842105263, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 33184; Mature: 33053

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTIPASGQPARPEILAFGEAMVEFNQSQPGSPQYLQGFGGDTSNFCIAAARQGARTGF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEHHCCCCCCE
VSAVGGDHFGRLLLDLWRREQVDTATVRVDAAAPTGVYFVSHGEHGHAFDYLRAGSAASR
EEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCC
YAPGDLPLEALAAARVLHLSGISFAISASACDAAFAAIDQARAHGVQVSFDTNLRLKLWP
CCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEC
LARARAVMLEALRRTDICLPSWDDVTVLTGLDERDAIVDALLDCGPRVVALKLGRDGAYV
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCEE
ATRDARRLVPAFVVEALDATGAGDCFGGAFIARLVAGDDAFVAARYANAAAALSTRGYGA
EECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCC
VAPIPDARAVRALLDG
CCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TRTIPASGQPARPEILAFGEAMVEFNQSQPGSPQYLQGFGGDTSNFCIAAARQGARTGF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEHHCCCCCCE
VSAVGGDHFGRLLLDLWRREQVDTATVRVDAAAPTGVYFVSHGEHGHAFDYLRAGSAASR
EEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCC
YAPGDLPLEALAAARVLHLSGISFAISASACDAAFAAIDQARAHGVQVSFDTNLRLKLWP
CCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEC
LARARAVMLEALRRTDICLPSWDDVTVLTGLDERDAIVDALLDCGPRVVALKLGRDGAYV
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCEE
ATRDARRLVPAFVVEALDATGAGDCFGGAFIARLVAGDDAFVAARYANAAAALSTRGYGA
EECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCC
VAPIPDARAVRALLDG
CCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]