| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027186
Identifier: 238027186
GI number: 238027186
Start: 1722241
End: 1724133
Strand: Direct
Name: 238027186
Synonym: bglu_1g15720
Alternate gene names: NA
Gene position: 1722241-1724133 (Clockwise)
Preceding gene: 238027185
Following gene: 238027187
Centisome position: 44.09
GC content: 68.83
Gene sequence:
>1893_bases GTGGCTGAATCGTCTGTCATCCGGGAATTCCTGGTCCGGCTCGGCTTCAAGATCGACGTCGACACCCAGAAGAAATTCAC GGACGGCGTCGAGGGGGCGACGAAGAAGACCGAGGAGCTCGACAAGGCGCAGGTGAAGGCCGGCAAATCGGCTTTGGGCA TGGCCGCCGCATTCGTCGGCGCCGCGGCGTTCGTTGGTGCGCGCACGGTCGATTTCGCGTCGAAGCTGGAGAACCTGCAC TTCGCGGCCCGCCGGACCGGCGCGGCCGCGAGCAGCCTGAAGGCGGTGGCGAACGCCGCGCAGGATGTCGGCGTGTCTGC CGACCAGGCGCAGAGCAGCATCGAGAACGTCGCGCGCTTCATGCGCAACAACCCGGCCGGCGAGAGCTATATCGCGTCGC TGGGCGTGCAGACGCGCGACGCGAACGGCCATCTGCGCGACACGGTCGACCTCGTCAATGACATCGGCAAGGTGATGTCG AAGAAGGATGTCTGGCTCGGCGCGCAGTATGCACAGCAGCTCGGCATCGACGAGAACTACATGCTGGGCATGCGCGACCC GGCTTACCAGGCATCCTACGATCGCGCCAAGAAGGACTACGTCAGCAGTGGCGTCGATTCGGCGAACAACGGCGGCCACA GTCTCATGACCGCGCTGCGCCATCTGCAGAGCGGCTTCGAGGGAAAGGTCGGCACCTATGGGGCGTTCGGGATCGAGACC GGCGCGACGCTGGGCGGCGGCCTGCTGACCTACTACGCTGGCAAGAAGGCGGTGCAGGCCGCGGTCGGCAAGGCGCTGGG CGCTGGCGCGCAGGAAGCGGCGGCGAAGGCGGCCACGGCCGCCGCCGAGACGGCGGCGAAGACTGCCGCCACTGAGGTCG CCACGAAAGCGGCCACGACGGCAGCCACCGAAGCGGGCGGTGCCGCAGCGGCTGCTGCTGCCGGCGCTGCGACGAAGACG GCCGCCGGCCGCTCGGCGGGCTTGCTTGCGCGTGCGCTACCGTGGGCCGGCCGTGCTCTGGGCGGCTTGGGCCTGCTGTT CCACAGCGAGGACTTGAACAAGGGCGAGGACGAGATCCTGAAGCGGCGCGATGCGCTGTTGAGGTCTGGTGGCAAGCTCG ATGTGTCGACGCCAGCGGCGCCGAGCAGCGGGCCGGCTTCGCCGCCTGTGCCAGCCGGGCAGTCATCCGCAGCGAATGCG CCGCCCGGGGGCACGCTCGCCGAGCGGCTCGCAAACTCGGCGCTTGGCCGGCTGATCGCCCGGGGCGAGGGCGGCTACAG CAGCGTCAATCGCGGCGCGCGCGGCGGCTATGCGGCCGGCACCGAGGATCTCGCCAACATGACGCTGGCCGAGGTGATGG CCGCGCAGCGCAGCGGCAAGTTCAACGCCGCCGGCCGCTACCAGATCGTGCGCGACACGCTGGCAGAGGCAGCACGCGCA CTGAACCTGAAGGGCGACGAGAAATTCGACCAAAAGCTCCAGGACCGCATCTTTGGCGACTACCTGCTCACGCGGAAGCG CCGCGCGATCGGCGACTTCCTGTCGGGCAAGAGCAGCGACCTGCACGCGGCGCTGCTGGCCACCTCGCGCGAATGGGCGA GCGTGGCGAATCCGGACACCGGGCGCAGCTACTACGACGGGGTGGGCAAGAACCACGCGAGCATCACGGCGAAGGAGCTG GAGAACGCCTTGCGCAATTCGCAGTCGCTGTTCGGGCCGGCTGGTGCGCTGTCGCTTGCGCAGCGCGCCGCGCCGCACAT CGAGATCCACAACGATGTGAAGATCCAGGTGTCCGGCACGGCAGACCCGAACGAGACGGCGCGCGCCGTCGGGCGCGAGC AACAGACAGTGGCCGACGCCACGGTCCGTAACATGCGCGGGGTGTACCAGTGA
Upstream 100 bases:
>100_bases AACGGCGTGCTCGGGCTTGAGGACATCGCGCTGATGAACGACTCGCTCGCCGTGCGGGCGGACAACGAAGCGGCCGCACG CCGCAGGCAGGAGCAAAAAC
Downstream 100 bases:
>100_bases CGACGATATCCGACGTGCTCGATGTCACGCTGACCGGTGGCAAGTCCATCGGCGGCGTGCCCATTTCTGCTGTCGTCGAG GAGATCTACAACGACGACAT
Product: phage-related tail protein
Products: NA
Alternate protein names: Phage-Related Tail Protein; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Lytic Transglycosylase Catalytic; Phage Glucosaminidase
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MAESSVIREFLVRLGFKIDVDTQKKFTDGVEGATKKTEELDKAQVKAGKSALGMAAAFVGAAAFVGARTVDFASKLENLH FAARRTGAAASSLKAVANAAQDVGVSADQAQSSIENVARFMRNNPAGESYIASLGVQTRDANGHLRDTVDLVNDIGKVMS KKDVWLGAQYAQQLGIDENYMLGMRDPAYQASYDRAKKDYVSSGVDSANNGGHSLMTALRHLQSGFEGKVGTYGAFGIET GATLGGGLLTYYAGKKAVQAAVGKALGAGAQEAAAKAATAAAETAAKTAATEVATKAATTAATEAGGAAAAAAAGAATKT AAGRSAGLLARALPWAGRALGGLGLLFHSEDLNKGEDEILKRRDALLRSGGKLDVSTPAAPSSGPASPPVPAGQSSAANA PPGGTLAERLANSALGRLIARGEGGYSSVNRGARGGYAAGTEDLANMTLAEVMAAQRSGKFNAAGRYQIVRDTLAEAARA LNLKGDEKFDQKLQDRIFGDYLLTRKRRAIGDFLSGKSSDLHAALLATSREWASVANPDTGRSYYDGVGKNHASITAKEL ENALRNSQSLFGPAGALSLAQRAAPHIEIHNDVKIQVSGTADPNETARAVGREQQTVADATVRNMRGVYQ
Sequences:
>Translated_630_residues MAESSVIREFLVRLGFKIDVDTQKKFTDGVEGATKKTEELDKAQVKAGKSALGMAAAFVGAAAFVGARTVDFASKLENLH FAARRTGAAASSLKAVANAAQDVGVSADQAQSSIENVARFMRNNPAGESYIASLGVQTRDANGHLRDTVDLVNDIGKVMS KKDVWLGAQYAQQLGIDENYMLGMRDPAYQASYDRAKKDYVSSGVDSANNGGHSLMTALRHLQSGFEGKVGTYGAFGIET GATLGGGLLTYYAGKKAVQAAVGKALGAGAQEAAAKAATAAAETAAKTAATEVATKAATTAATEAGGAAAAAAAGAATKT AAGRSAGLLARALPWAGRALGGLGLLFHSEDLNKGEDEILKRRDALLRSGGKLDVSTPAAPSSGPASPPVPAGQSSAANA PPGGTLAERLANSALGRLIARGEGGYSSVNRGARGGYAAGTEDLANMTLAEVMAAQRSGKFNAAGRYQIVRDTLAEAARA LNLKGDEKFDQKLQDRIFGDYLLTRKRRAIGDFLSGKSSDLHAALLATSREWASVANPDTGRSYYDGVGKNHASITAKEL ENALRNSQSLFGPAGALSLAQRAAPHIEIHNDVKIQVSGTADPNETARAVGREQQTVADATVRNMRGVYQ >Mature_629_residues AESSVIREFLVRLGFKIDVDTQKKFTDGVEGATKKTEELDKAQVKAGKSALGMAAAFVGAAAFVGARTVDFASKLENLHF AARRTGAAASSLKAVANAAQDVGVSADQAQSSIENVARFMRNNPAGESYIASLGVQTRDANGHLRDTVDLVNDIGKVMSK KDVWLGAQYAQQLGIDENYMLGMRDPAYQASYDRAKKDYVSSGVDSANNGGHSLMTALRHLQSGFEGKVGTYGAFGIETG ATLGGGLLTYYAGKKAVQAAVGKALGAGAQEAAAKAATAAAETAAKTAATEVATKAATTAATEAGGAAAAAAAGAATKTA AGRSAGLLARALPWAGRALGGLGLLFHSEDLNKGEDEILKRRDALLRSGGKLDVSTPAAPSSGPASPPVPAGQSSAANAP PGGTLAERLANSALGRLIARGEGGYSSVNRGARGGYAAGTEDLANMTLAEVMAAQRSGKFNAAGRYQIVRDTLAEAARAL NLKGDEKFDQKLQDRIFGDYLLTRKRRAIGDFLSGKSSDLHAALLATSREWASVANPDTGRSYYDGVGKNHASITAKELE NALRNSQSLFGPAGALSLAQRAAPHIEIHNDVKIQVSGTADPNETARAVGREQQTVADATVRNMRGVYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65062; Mature: 64931
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESSVIREFLVRLGFKIDVDTQKKFTDGVEGATKKTEELDKAQVKAGKSALGMAAAFVG CCCHHHHHHHHHHCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH AAAFVGARTVDFASKLENLHFAARRTGAAASSLKAVANAAQDVGVSADQAQSSIENVARF HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MRNNPAGESYIASLGVQTRDANGHLRDTVDLVNDIGKVMSKKDVWLGAQYAQQLGIDENY HHCCCCCHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC MLGMRDPAYQASYDRAKKDYVSSGVDSANNGGHSLMTALRHLQSGFEGKVGTYGAFGIET EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GATLGGGLLTYYAGKKAVQAAVGKALGAGAQEAAAKAATAAAETAAKTAATEVATKAATT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATEAGGAAAAAAAGAATKTAAGRSAGLLARALPWAGRALGGLGLLFHSEDLNKGEDEIL HHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCHHHHH KRRDALLRSGGKLDVSTPAAPSSGPASPPVPAGQSSAANAPPGGTLAERLANSALGRLIA HHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RGEGGYSSVNRGARGGYAAGTEDLANMTLAEVMAAQRSGKFNAAGRYQIVRDTLAEAARA CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LNLKGDEKFDQKLQDRIFGDYLLTRKRRAIGDFLSGKSSDLHAALLATSREWASVANPDT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHCCCCCC GRSYYDGVGKNHASITAKELENALRNSQSLFGPAGALSLAQRAAPHIEIHNDVKIQVSGT CCHHHHCCCCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCEEEEEECC ADPNETARAVGREQQTVADATVRNMRGVYQ CCCHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AESSVIREFLVRLGFKIDVDTQKKFTDGVEGATKKTEELDKAQVKAGKSALGMAAAFVG CCHHHHHHHHHHCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH AAAFVGARTVDFASKLENLHFAARRTGAAASSLKAVANAAQDVGVSADQAQSSIENVARF HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MRNNPAGESYIASLGVQTRDANGHLRDTVDLVNDIGKVMSKKDVWLGAQYAQQLGIDENY HHCCCCCHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC MLGMRDPAYQASYDRAKKDYVSSGVDSANNGGHSLMTALRHLQSGFEGKVGTYGAFGIET EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GATLGGGLLTYYAGKKAVQAAVGKALGAGAQEAAAKAATAAAETAAKTAATEVATKAATT CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATEAGGAAAAAAAGAATKTAAGRSAGLLARALPWAGRALGGLGLLFHSEDLNKGEDEIL HHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCHHHHH KRRDALLRSGGKLDVSTPAAPSSGPASPPVPAGQSSAANAPPGGTLAERLANSALGRLIA HHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RGEGGYSSVNRGARGGYAAGTEDLANMTLAEVMAAQRSGKFNAAGRYQIVRDTLAEAARA CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LNLKGDEKFDQKLQDRIFGDYLLTRKRRAIGDFLSGKSSDLHAALLATSREWASVANPDT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHCCCCCC GRSYYDGVGKNHASITAKELENALRNSQSLFGPAGALSLAQRAAPHIEIHNDVKIQVSGT CCHHHHCCCCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCEEEEEECC ADPNETARAVGREQQTVADATVRNMRGVYQ CCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA