| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027180
Identifier: 238027180
GI number: 238027180
Start: 1718122
End: 1718712
Strand: Direct
Name: 238027180
Synonym: bglu_1g15660
Alternate gene names: NA
Gene position: 1718122-1718712 (Clockwise)
Preceding gene: 238027179
Following gene: 238027181
Centisome position: 43.98
GC content: 67.01
Gene sequence:
>591_bases ATGAACGATAGCTCGACCGGTGGATACCTCGCGCCGACCGTCGAGGCGCCTCCGGACGAGGACGACGCGCTCGATCACTT GGTGCATGACCTGATCGCAGGCGTCACCGCGCTGTCACCCGATCTGGTGAGGCCGCGCTGGCGCCCCACCGTATCCAAGC AGCCGGCCCCCGATGCGAATTGGTGCGCGTTCGGCGTGAGCGACCAGGATCCCGACGCCAATCCCGTGATCCAGCACGAC GGCACGGGCGACGGCAGCGACACCTACATCCGGCACGAGGGCATCGAGGTCGCCTGCTCATTCTACGGGCCGAACGCGAA GGGCTACGCACAGCGCCTGGCCGACGGCCTGGCGATCCCGCAGAACCGCGAGGCGCTCGGCGTGAACGACATGGCGTTCG TCGGCGTGTCCGGGATCCGCGCGGCGCCAGACTTCGTCAACCAGCAGTGGATCAGGCGGTACGACATCACGGTCACGCTG CGCCGCAAGATCACCCGGACCTACCCGGTCCTCAACCTGCTTTCCGCCTCGGTGACTTCGACGACTGATTCGTCGGCGCC GGTGGCGAGCACCACCACCATTCACCAATAG
Upstream 100 bases:
>100_bases AGGGCGCCACCTACACCGTTGTCAACGTGAACGACTACTCGCACTTCGGCCGCGGCTTCGTCTGCGCGACGTGCGACCTG AAACCTCTGACGGGATCCTC
Downstream 100 bases:
>100_bases AGGACCACATGGCAAAGGCTCTTCCGGTCGCCCGCCTCATCAGTGTCGCGGTCACGCTCACCGCGCTTGCTGCGCAGGGT GCGAACCTCAACACCGCGTT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNDSSTGGYLAPTVEAPPDEDDALDHLVHDLIAGVTALSPDLVRPRWRPTVSKQPAPDANWCAFGVSDQDPDANPVIQHD GTGDGSDTYIRHEGIEVACSFYGPNAKGYAQRLADGLAIPQNREALGVNDMAFVGVSGIRAAPDFVNQQWIRRYDITVTL RRKITRTYPVLNLLSASVTSTTDSSAPVASTTTIHQ
Sequences:
>Translated_196_residues MNDSSTGGYLAPTVEAPPDEDDALDHLVHDLIAGVTALSPDLVRPRWRPTVSKQPAPDANWCAFGVSDQDPDANPVIQHD GTGDGSDTYIRHEGIEVACSFYGPNAKGYAQRLADGLAIPQNREALGVNDMAFVGVSGIRAAPDFVNQQWIRRYDITVTL RRKITRTYPVLNLLSASVTSTTDSSAPVASTTTIHQ >Mature_196_residues MNDSSTGGYLAPTVEAPPDEDDALDHLVHDLIAGVTALSPDLVRPRWRPTVSKQPAPDANWCAFGVSDQDPDANPVIQHD GTGDGSDTYIRHEGIEVACSFYGPNAKGYAQRLADGLAIPQNREALGVNDMAFVGVSGIRAAPDFVNQQWIRRYDITVTL RRKITRTYPVLNLLSASVTSTTDSSAPVASTTTIHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21102; Mature: 21102
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSSTGGYLAPTVEAPPDEDDALDHLVHDLIAGVTALSPDLVRPRWRPTVSKQPAPDAN CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCC WCAFGVSDQDPDANPVIQHDGTGDGSDTYIRHEGIEVACSFYGPNAKGYAQRLADGLAIP EEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCEEEEEEEECCCCHHHHHHHHHCCCCC QNREALGVNDMAFVGVSGIRAAPDFVNQQWIRRYDITVTLRRKITRTYPVLNLLSASVTS CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCC TTDSSAPVASTTTIHQ CCCCCCCCCCCCCCCC >Mature Secondary Structure MNDSSTGGYLAPTVEAPPDEDDALDHLVHDLIAGVTALSPDLVRPRWRPTVSKQPAPDAN CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCC WCAFGVSDQDPDANPVIQHDGTGDGSDTYIRHEGIEVACSFYGPNAKGYAQRLADGLAIP EEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCEEEEEEEECCCCHHHHHHHHHCCCCC QNREALGVNDMAFVGVSGIRAAPDFVNQQWIRRYDITVTLRRKITRTYPVLNLLSASVTS CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCC TTDSSAPVASTTTIHQ CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA