| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027179
Identifier: 238027179
GI number: 238027179
Start: 1717742
End: 1718125
Strand: Direct
Name: 238027179
Synonym: bglu_1g15650
Alternate gene names: NA
Gene position: 1717742-1718125 (Clockwise)
Preceding gene: 238027178
Following gene: 238027180
Centisome position: 43.97
GC content: 61.46
Gene sequence:
>384_bases ATGGCGTTTCTCGATGTCACCGACGTGCTGCTCGATCCGGATTTCATGAACACCGGACTCATCTGCAATCGCATGACGCA GACGGTCAATGCCTACGGTGAGGCGACGAACACAGCCACGCCGATCCCGTTCGCCGCAGTGGTCACCAGCGACAAGGGAG ACATCCTGCATCGGAACGCCGACGGCAGTCGAATCGTTGGTTCGATCACGTTGCACACGCCGTTCCGTCTGCGTGACGGC GGCCCAGATGCGACTGCCGACGCGGACGAGATCGTCTGGCAGGGCGCCACCTACACCGTTGTCAACGTGAACGACTACTC GCACTTCGGCCGCGGCTTCGTCTGCGCGACGTGCGACCTGAAACCTCTGACGGGATCCTCATGA
Upstream 100 bases:
>100_bases TCGATCACCTACGTGGTGCGCAAGAAGGGCGCGAAGTAGCGCGCCAACCCCAGAATCCCCGAGGGCCGCCGCGTGCGGCC CTTTTGCATTGGAGCCGCGA
Downstream 100 bases:
>100_bases ACGATAGCTCGACCGGTGGATACCTCGCGCCGACCGTCGAGGCGCCTCCGGACGAGGACGACGCGCTCGATCACTTGGTG CATGACCTGATCGCAGGCGT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Phage Head-Tail Adaptor
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAFLDVTDVLLDPDFMNTGLICNRMTQTVNAYGEATNTATPIPFAAVVTSDKGDILHRNADGSRIVGSITLHTPFRLRDG GPDATADADEIVWQGATYTVVNVNDYSHFGRGFVCATCDLKPLTGSS
Sequences:
>Translated_127_residues MAFLDVTDVLLDPDFMNTGLICNRMTQTVNAYGEATNTATPIPFAAVVTSDKGDILHRNADGSRIVGSITLHTPFRLRDG GPDATADADEIVWQGATYTVVNVNDYSHFGRGFVCATCDLKPLTGSS >Mature_126_residues AFLDVTDVLLDPDFMNTGLICNRMTQTVNAYGEATNTATPIPFAAVVTSDKGDILHRNADGSRIVGSITLHTPFRLRDGG PDATADADEIVWQGATYTVVNVNDYSHFGRGFVCATCDLKPLTGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13584; Mature: 13453
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLDVTDVLLDPDFMNTGLICNRMTQTVNAYGEATNTATPIPFAAVVTSDKGDILHRNA CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECC DGSRIVGSITLHTPFRLRDGGPDATADADEIVWQGATYTVVNVNDYSHFGRGFVCATCDL CCCEEEEEEEECCCEEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECCC KPLTGSS CCCCCCC >Mature Secondary Structure AFLDVTDVLLDPDFMNTGLICNRMTQTVNAYGEATNTATPIPFAAVVTSDKGDILHRNA CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECC DGSRIVGSITLHTPFRLRDGGPDATADADEIVWQGATYTVVNVNDYSHFGRGFVCATCDL CCCEEEEEEEECCCEEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECCC KPLTGSS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA