| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027178
Identifier: 238027178
GI number: 238027178
Start: 1717093
End: 1717680
Strand: Direct
Name: 238027178
Synonym: bglu_1g15640
Alternate gene names: NA
Gene position: 1717093-1717680 (Clockwise)
Preceding gene: 238027177
Following gene: 238027179
Centisome position: 43.95
GC content: 70.07
Gene sequence:
>588_bases ATGGCGGTGAAGATGACGCAGGACAACCTCGACGCGGTGCTGAAGTCGATCGCCGCTCTGGTGCAGCAGGAGGTGCTCGT CGGGGTACCCGACAGCACGGCGGGCCGCAAGGACGAGGGCACGCCGATCAGCAACGCGGAGATCGGCTACATCATGGAGA CGGGCTCGCCGGCCAACAACGTGCCGGCGCGGCCGCACCTGGTGCCCGGCGTCGAGGATGCGCTGCCGCGCGTGACTGCG CAACTGCAGCGCGGCGTCGATGCGGCGCTGAGCGGAAACCTCGAGAAGGTCGGCCAGTCGCTCGGCGCGGCCGGCACGCT GGCGGCTTCCTCGGTGCGGCTGCGCATTCGCAGCAACGTGCCGCCGCCGCTCGCGCCGTCGACGGTGGCGAGCCGCTACC GGCAACGCGGCACGAAGGGCCCGCGCAAGGCAGAGAAGGAATACGCCGCCTTGATCGACGCCGGCGCGCAGGCGGCGGGC ATGAGCCTGGCCGAGATCCAGTCGGCGGCCGGCATCATCCCGCTGATCAACACCGGCGAGTACCTGAAGTCGATCACCTA CGTGGTGCGCAAGAAGGGCGCGAAGTAG
Upstream 100 bases:
>100_bases TGGAACAGCACGATGTACGGCATCCGCTACCTCACGCTGGCGCGCATGATGGGCGCCGGCGGCCTGCAGGTGTAGCGCGC GCCGCGCGCGGGAGATCGGC
Downstream 100 bases:
>100_bases CGCGCCAACCCCAGAATCCCCGAGGGCCGCCGCGTGCGGCCCTTTTGCATTGGAGCCGCGAATGGCGTTTCTCGATGTCA CCGACGTGCTGCTCGATCCG
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAVKMTQDNLDAVLKSIAALVQQEVLVGVPDSTAGRKDEGTPISNAEIGYIMETGSPANNVPARPHLVPGVEDALPRVTA QLQRGVDAALSGNLEKVGQSLGAAGTLAASSVRLRIRSNVPPPLAPSTVASRYRQRGTKGPRKAEKEYAALIDAGAQAAG MSLAEIQSAAGIIPLINTGEYLKSITYVVRKKGAK
Sequences:
>Translated_195_residues MAVKMTQDNLDAVLKSIAALVQQEVLVGVPDSTAGRKDEGTPISNAEIGYIMETGSPANNVPARPHLVPGVEDALPRVTA QLQRGVDAALSGNLEKVGQSLGAAGTLAASSVRLRIRSNVPPPLAPSTVASRYRQRGTKGPRKAEKEYAALIDAGAQAAG MSLAEIQSAAGIIPLINTGEYLKSITYVVRKKGAK >Mature_194_residues AVKMTQDNLDAVLKSIAALVQQEVLVGVPDSTAGRKDEGTPISNAEIGYIMETGSPANNVPARPHLVPGVEDALPRVTAQ LQRGVDAALSGNLEKVGQSLGAAGTLAASSVRLRIRSNVPPPLAPSTVASRYRQRGTKGPRKAEKEYAALIDAGAQAAGM SLAEIQSAAGIIPLINTGEYLKSITYVVRKKGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20263; Mature: 20132
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKMTQDNLDAVLKSIAALVQQEVLVGVPDSTAGRKDEGTPISNAEIGYIMETGSPANN CCEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC VPARPHLVPGVEDALPRVTAQLQRGVDAALSGNLEKVGQSLGAAGTLAASSVRLRIRSNV CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCC PPPLAPSTVASRYRQRGTKGPRKAEKEYAALIDAGAQAAGMSLAEIQSAAGIIPLINTGE CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCEEECCCHH YLKSITYVVRKKGAK HHHHHHHHHHHCCCC >Mature Secondary Structure AVKMTQDNLDAVLKSIAALVQQEVLVGVPDSTAGRKDEGTPISNAEIGYIMETGSPANN CEECCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC VPARPHLVPGVEDALPRVTAQLQRGVDAALSGNLEKVGQSLGAAGTLAASSVRLRIRSNV CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCC PPPLAPSTVASRYRQRGTKGPRKAEKEYAALIDAGAQAAGMSLAEIQSAAGIIPLINTGE CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCEEECCCHH YLKSITYVVRKKGAK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA