| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027177
Identifier: 238027177
GI number: 238027177
Start: 1716684
End: 1717067
Strand: Direct
Name: 238027177
Synonym: bglu_1g15630
Alternate gene names: NA
Gene position: 1716684-1717067 (Clockwise)
Preceding gene: 238027176
Following gene: 238027178
Centisome position: 43.94
GC content: 69.27
Gene sequence:
>384_bases GTGGACATCGCCCAGTTCCGCCAGACGTTCCCCGAGTTCGGCGACGCAACGCAGTATTCCGACGTGGTCGTGCAGATCTG GCTGACCGTGGCCGTCTCGCTCGTGAACCCGCTGCGCTGGTGTGAGTTGACCGACATCGGCGTCGGGCTGGTCACCGCGC ACCACCTCGCGCTGGCGGCGCGCGACCAGAAGACTGCCGCCGTCGGCGGCGTCCCGGGCGCGGCGGCCGCGCCGCAGTCG TCGAAATCGGTCGACAAGGTCAGCGCGAGCTACGACACGTCGGCCGTCACGCTCGACAGCGCGGGTTTCTGGAACAGCAC GATGTACGGCATCCGCTACCTCACGCTGGCGCGCATGATGGGCGCCGGCGGCCTGCAGGTGTAG
Upstream 100 bases:
>100_bases GCCGACACCGGCACGCAGCGCGGCGGCAAGCGCGCATAATGGCCGGCCGGCGGCGCGCCGCAACGGCGCCCGTCGGCCCC ATCCAACACCGAGGTGAGCA
Downstream 100 bases:
>100_bases CGCGCGCCGCGCGCGGGAGATCGGCATGGCGGTGAAGATGACGCAGGACAACCTCGACGCGGTGCTGAAGTCGATCGCCG CTCTGGTGCAGCAGGAGGTG
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDIAQFRQTFPEFGDATQYSDVVVQIWLTVAVSLVNPLRWCELTDIGVGLVTAHHLALAARDQKTAAVGGVPGAAAAPQS SKSVDKVSASYDTSAVTLDSAGFWNSTMYGIRYLTLARMMGAGGLQV
Sequences:
>Translated_127_residues MDIAQFRQTFPEFGDATQYSDVVVQIWLTVAVSLVNPLRWCELTDIGVGLVTAHHLALAARDQKTAAVGGVPGAAAAPQS SKSVDKVSASYDTSAVTLDSAGFWNSTMYGIRYLTLARMMGAGGLQV >Mature_127_residues MDIAQFRQTFPEFGDATQYSDVVVQIWLTVAVSLVNPLRWCELTDIGVGLVTAHHLALAARDQKTAAVGGVPGAAAAPQS SKSVDKVSASYDTSAVTLDSAGFWNSTMYGIRYLTLARMMGAGGLQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13452; Mature: 13452
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIAQFRQTFPEFGDATQYSDVVVQIWLTVAVSLVNPLRWCELTDIGVGLVTAHHLALAA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDQKTAAVGGVPGAAAAPQSSKSVDKVSASYDTSAVTLDSAGFWNSTMYGIRYLTLARMM CCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GAGGLQV CCCCCCC >Mature Secondary Structure MDIAQFRQTFPEFGDATQYSDVVVQIWLTVAVSLVNPLRWCELTDIGVGLVTAHHLALAA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDQKTAAVGGVPGAAAAPQSSKSVDKVSASYDTSAVTLDSAGFWNSTMYGIRYLTLARMM CCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GAGGLQV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA