| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is phbC [H]
Identifier: 238027092
GI number: 238027092
Start: 1620884
End: 1622797
Strand: Direct
Name: phbC [H]
Synonym: bglu_1g14710
Alternate gene names: 238027092
Gene position: 1620884-1622797 (Clockwise)
Preceding gene: 238027091
Following gene: 238027093
Centisome position: 41.49
GC content: 68.7
Gene sequence:
>1914_bases ATGACAGCACCGAAAAATTCGTCGACTTCCTCACAAGCGGACTTCACCCCGGGGCGCCAGGCGGCCGATGCGTCCCAGCC GATGCAGCAGATGTTCGGCGCGTGGCTCGATGCCTGGAGCCGCCTCGCCGAGCCGCTGCGCGCGGCCGCGCAGCAGGCGC AGCCGCGGCCGGACATGTCCGCGGCGTTCGCCTTTCCCTTCACGATGCCGGCCCGGCGCGAGTGGCCGGCCGCTGGCGGT GCGGGCCTGCCGTTCGCCGGCCTGTTCGGCCAGGGCGGCGCGGCGCCGCTCGCCGGCATGGCGCTGCCGGTTGCGGCGGT GCCGCCGGAGAAGCTGCGGCAGCTGCAGGCCGACTATGCGCGCGAGAGCGCGGAGCTGTTCCGGCAGGCCACCTCGGCCG AGCTGGTCGCCCCCGAACTGAAGGACCGCCGGTTCAGCGCCGAGGCCTGGAAGGCCTCGCCCGCGCATGCGTTCACGGCG GCCTGGTATCTGCTCAACGCGCGCTATCTGCATGCGCTCGCCGACGCGGTCGAGACCGACCCGAAAACGCGCGAGCGAAT TCGTTTCGCGGTGCAGCAATGGACCGCCGCGACCGCGCCGAGCAACTTCCTCGCGCTCAATCCGGAAGCGCAGAAGAACC TGCTCGAGACGCAGGGCGAAAGCCTGCGGCAGGGCCTGAGCAACCTGCTCGCCGATCTGCAGCGCGGCAAGATCTCGCAA ACCGACGAATCGCAGTTCGTGGTCGGCAAAAATCTCGCGAACACCGAGGGCGCGGTGGTGTTCGAGAACGCGCTGATGCA ACTGATCCAGTACAAACCGGTCACGCCGAGCGTCTACGAGCGGCCGTTGCTGATCGTGCCGCCCTGCATCAACAAGTTCT ACATCCTCGATCTGCAGCCCGAGAATTCGCTCGTCGCGCATGCGCTCGCGAGCGGCCACCAGGTGTTCCTGATTTCGTGG CGCAACGCGGACGCATCGATCGCCGGCGCGACCTGGGACGACTACATGAACGACGGCGTGCTGGCCGCGCTCGACGCCGT GCAGCAGATCAGCGCGCGCGAGCAGGTCAACGCGCTCGGCTTCTGCGTCGGCGGCACCATGCTGGCCACCGCGCTCGCGG TGCTGGCCGCGCGCGGCCAGCACCCGGTCGCCTCGATGACGCTGCTCACCGCGATGCTCGACTTCAGCGACACCGGCGTG CTCGACGTGTTCGTCGACGAGGCGCACGTGCAGATGCGCGAGCAGACCATCGGCGGCAAGAACGGCGCAGCGCCCGGGCT CATGCACGGCGTCGAGTTCGCGAACACGTTCTCGTTCCTGCGGCCGAACGATCTGGTCTGGAACTACGTGGTCGACAATT ATCTGAAGGGCCGCACGCCGGCGCCGTTCGATCTGCTGTACTGGAACAGCGACTCGACCAACCTGCCGGGGCCGATGTAC GCGTGGTATCTGCGCCATACCTATCTCGAAAACCGGCTGCGCGAGCCCGATGCGCTGACGGTCTGCGGCGAGCCCGTGGA CCTCGCGCGGATCGACGTGCCGACCTTCATCTACGGCTCGCGCGACGATCACATCGTGCCGTGGCAGACCGCCTACGCCT CCACCTCGCTGCTGACCGGGCCGCTGCGCTTCGTGCTGGGCGCCTCGGGGCACATCGCCGGCGTGATCAATCCGCCCGCG AAGAACAAGCGCAGCTACTGGACCTTCGACTCGCCCGACGCGAAGGAGCTGCCCGAGCATGCGCAGGACTGGCTCGAGGC GGCCACCGAGCATCCGGGCAGCTGGTGGCCCGAATGGATCGACTGGCTCGACCAATACGGCGGCCGCAAGACCAAGCCGC GCGCCGCGCTCGGCTCGGCGCGGTTTCCGGTGATCGAAGCGGCGCCGGGCCGCTACGTGCTGGAACGCAGTTGA
Upstream 100 bases:
>100_bases GGCCGTCCTCTAGCGCGTGATGCCGAGCGTGTCGCGCGGTCTCGCGGAGGCCGACGCAGGATGTCCAGACGCTCCGCCAG GAATCACCGGTAACGCAGGT
Downstream 100 bases:
>100_bases CGCGGTGCGCGGGACATTGACGGATGGCGGCGGGCGGCGCACGCTCGCCGACTGCTTCCGGGGATTTTTCAACTGAGCGG GTCGCGCTTGCCGGCCTGGA
Product: poly-beta-hydroxybutyrate polymerase
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MTAPKNSSTSSQADFTPGRQAADASQPMQQMFGAWLDAWSRLAEPLRAAAQQAQPRPDMSAAFAFPFTMPARREWPAAGG AGLPFAGLFGQGGAAPLAGMALPVAAVPPEKLRQLQADYARESAELFRQATSAELVAPELKDRRFSAEAWKASPAHAFTA AWYLLNARYLHALADAVETDPKTRERIRFAVQQWTAATAPSNFLALNPEAQKNLLETQGESLRQGLSNLLADLQRGKISQ TDESQFVVGKNLANTEGAVVFENALMQLIQYKPVTPSVYERPLLIVPPCINKFYILDLQPENSLVAHALASGHQVFLISW RNADASIAGATWDDYMNDGVLAALDAVQQISAREQVNALGFCVGGTMLATALAVLAARGQHPVASMTLLTAMLDFSDTGV LDVFVDEAHVQMREQTIGGKNGAAPGLMHGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTNLPGPMY AWYLRHTYLENRLREPDALTVCGEPVDLARIDVPTFIYGSRDDHIVPWQTAYASTSLLTGPLRFVLGASGHIAGVINPPA KNKRSYWTFDSPDAKELPEHAQDWLEAATEHPGSWWPEWIDWLDQYGGRKTKPRAALGSARFPVIEAAPGRYVLERS
Sequences:
>Translated_637_residues MTAPKNSSTSSQADFTPGRQAADASQPMQQMFGAWLDAWSRLAEPLRAAAQQAQPRPDMSAAFAFPFTMPARREWPAAGG AGLPFAGLFGQGGAAPLAGMALPVAAVPPEKLRQLQADYARESAELFRQATSAELVAPELKDRRFSAEAWKASPAHAFTA AWYLLNARYLHALADAVETDPKTRERIRFAVQQWTAATAPSNFLALNPEAQKNLLETQGESLRQGLSNLLADLQRGKISQ TDESQFVVGKNLANTEGAVVFENALMQLIQYKPVTPSVYERPLLIVPPCINKFYILDLQPENSLVAHALASGHQVFLISW RNADASIAGATWDDYMNDGVLAALDAVQQISAREQVNALGFCVGGTMLATALAVLAARGQHPVASMTLLTAMLDFSDTGV LDVFVDEAHVQMREQTIGGKNGAAPGLMHGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTNLPGPMY AWYLRHTYLENRLREPDALTVCGEPVDLARIDVPTFIYGSRDDHIVPWQTAYASTSLLTGPLRFVLGASGHIAGVINPPA KNKRSYWTFDSPDAKELPEHAQDWLEAATEHPGSWWPEWIDWLDQYGGRKTKPRAALGSARFPVIEAAPGRYVLERS >Mature_636_residues TAPKNSSTSSQADFTPGRQAADASQPMQQMFGAWLDAWSRLAEPLRAAAQQAQPRPDMSAAFAFPFTMPARREWPAAGGA GLPFAGLFGQGGAAPLAGMALPVAAVPPEKLRQLQADYARESAELFRQATSAELVAPELKDRRFSAEAWKASPAHAFTAA WYLLNARYLHALADAVETDPKTRERIRFAVQQWTAATAPSNFLALNPEAQKNLLETQGESLRQGLSNLLADLQRGKISQT DESQFVVGKNLANTEGAVVFENALMQLIQYKPVTPSVYERPLLIVPPCINKFYILDLQPENSLVAHALASGHQVFLISWR NADASIAGATWDDYMNDGVLAALDAVQQISAREQVNALGFCVGGTMLATALAVLAARGQHPVASMTLLTAMLDFSDTGVL DVFVDEAHVQMREQTIGGKNGAAPGLMHGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTNLPGPMYA WYLRHTYLENRLREPDALTVCGEPVDLARIDVPTFIYGSRDDHIVPWQTAYASTSLLTGPLRFVLGASGHIAGVINPPAK NKRSYWTFDSPDAKELPEHAQDWLEAATEHPGSWWPEWIDWLDQYGGRKTKPRAALGSARFPVIEAAPGRYVLERS
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010963 - InterPro: IPR010941 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]
EC number: NA
Molecular weight: Translated: 69806; Mature: 69675
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPKNSSTSSQADFTPGRQAADASQPMQQMFGAWLDAWSRLAEPLRAAAQQAQPRPDMS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AAFAFPFTMPARREWPAAGGAGLPFAGLFGQGGAAPLAGMALPVAAVPPEKLRQLQADYA CEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH RESAELFRQATSAELVAPELKDRRFSAEAWKASPAHAFTAAWYLLNARYLHALADAVETD HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PKTRERIRFAVQQWTAATAPSNFLALNPEAQKNLLETQGESLRQGLSNLLADLQRGKISQ CHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TDESQFVVGKNLANTEGAVVFENALMQLIQYKPVTPSVYERPLLIVPPCINKFYILDLQP CCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCEEEEEECC ENSLVAHALASGHQVFLISWRNADASIAGATWDDYMNDGVLAALDAVQQISAREQVNALG CCHHHHHHHHCCCEEEEEEECCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FCVGGTMLATALAVLAARGQHPVASMTLLTAMLDFSDTGVLDVFVDEAHVQMREQTIGGK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCC NGAAPGLMHGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTNLPGPMY CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH AWYLRHTYLENRLREPDALTVCGEPVDLARIDVPTFIYGSRDDHIVPWQTAYASTSLLTG HHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH PLRFVLGASGHIAGVINPPAKNKRSYWTFDSPDAKELPEHAQDWLEAATEHPGSWWPEWI HHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH DWLDQYGGRKTKPRAALGSARFPVIEAAPGRYVLERS HHHHHHCCCCCCCHHHHCCCCCCEEECCCCCEEEECC >Mature Secondary Structure TAPKNSSTSSQADFTPGRQAADASQPMQQMFGAWLDAWSRLAEPLRAAAQQAQPRPDMS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AAFAFPFTMPARREWPAAGGAGLPFAGLFGQGGAAPLAGMALPVAAVPPEKLRQLQADYA CEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH RESAELFRQATSAELVAPELKDRRFSAEAWKASPAHAFTAAWYLLNARYLHALADAVETD HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PKTRERIRFAVQQWTAATAPSNFLALNPEAQKNLLETQGESLRQGLSNLLADLQRGKISQ CHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC TDESQFVVGKNLANTEGAVVFENALMQLIQYKPVTPSVYERPLLIVPPCINKFYILDLQP CCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCEEEEEECC ENSLVAHALASGHQVFLISWRNADASIAGATWDDYMNDGVLAALDAVQQISAREQVNALG CCHHHHHHHHCCCEEEEEEECCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FCVGGTMLATALAVLAARGQHPVASMTLLTAMLDFSDTGVLDVFVDEAHVQMREQTIGGK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCC NGAAPGLMHGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTNLPGPMY CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH AWYLRHTYLENRLREPDALTVCGEPVDLARIDVPTFIYGSRDDHIVPWQTAYASTSLLTG HHHHHHHHHHHHCCCCCCEEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH PLRFVLGASGHIAGVINPPAKNKRSYWTFDSPDAKELPEHAQDWLEAATEHPGSWWPEWI HHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH DWLDQYGGRKTKPRAALGSARFPVIEAAPGRYVLERS HHHHHHCCCCCCCHHHHCCCCCCEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670936; 1987116 [H]