| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027042
Identifier: 238027042
GI number: 238027042
Start: 1562604
End: 1563791
Strand: Direct
Name: 238027042
Synonym: bglu_1g14200
Alternate gene names: NA
Gene position: 1562604-1563791 (Clockwise)
Preceding gene: 238027041
Following gene: 238027044
Centisome position: 40.0
GC content: 74.07
Gene sequence:
>1188_bases ATGACCGATTCTTCCACCGGCGCCATCCGCCTGGTGCCGCTGCCCGGCGCCGCCGGGCTGTCTGCCCCGCAACGCAGCTT CAACACGCTGACCAAGCAGGTGGCCGCGCGGCGTGCGCGGCTGCGCGCCTGGGAGGCCGTCTGGCCGGCTTTCCAGCAGC GCTACCTGGACGAATGGGTGCCGCTCGCGCGCGCGGCCACCGGGCACGAGGCCGAACTGGTGCGCCGGCTCGATGTCGCG TTCGACATGAAGGGGCTGACCAAGGCCGAGCGCGCGCTGGTGTCGGAGCTGGTCGTGGCCTTCGCGCGCCCGCTGCTCGA CGGCGACGCGGCAGACGGCCTGCACGAGATCCACGCGCGCCATCAGCGGTCGCGACGCGGCGGCGAGGCGGCCGGCGCGG CGCCGCCGCATGGGCGTGACCGCAAGCGCGCCGGCACGGCTGACGATGATGCGGCGCCGGCGCGTTCCGAGGCGCCGGCC GCCGCAGCAGAGGACGAATCGGACGAGGCGATGATGCGTCACATCCAGGCCGAACTCGACGCGCAGGAGGCGCGCGCGGC CGCCGAGGCCGCAGCCCGCGACGCGGGACGCAGCCAGCGTCGGCGCGCCTCGAGGCGCAAGTCGGCCGACGCGGCGGCCG CGGACGATCCGGCGGCGCAGGATGGCCCCGACGATGCCGAGCGCGCCGCGGCCGAGGCCGTGCCCGAACTGCCGCCGGTG CAGATCAGCCGCTCGCTGCGCGAGCTGTACCGGCGCCTGGCCAGCGCACTGCATCCCGACCGCGAGACCGACCCCGACGA GCACGCGCGCAAGACCGACCTGATGCAGCGGCTCAATCGCGCCTACGACAGGCAGGACCTGCTGCAACTGCTCGAACTCG AGCGCGACCTGAATCCGGCCGGCGCGGACCGGCTCGCGGGCGCCGGCGACGAGCTGTTGCAGCATTACAACGGCATCCTG AAGGCACAACTCGGCGCGCTCGATCGCGAACTGCACCGCGTCGAGTCCGATTTCCGCCACGGCTACGGGATCGGTGCGTC GGCCATCCTGGCGCCGGACACGGCGCTGCGCACGCTGGGCGCCGACATCGCCGCGCTGCGGCGAGCGGTGGCGCAGCGCG AGCGCGATCTGCAGGCGTTTCGCGATCTCGGCTCGCTGAAGGACTGGCTCCGCGGCTTCGAGGCCTGA
Upstream 100 bases:
>100_bases ACGCGCGCTGAGCGGCGCGCCTCCGGCCTCGCCGCGGCCTCCCGCCCCGAGTCTTGTCTCGAGTCCTGCCCCGATTTCCG CCGCCACCGCGTTGTCATCC
Downstream 100 bases:
>100_bases GCCGGCCGCGCGGGTGGCAGGACGGCGCGGCCGGCGGCGCCGGGGGCTGCGCCCTTACGCGTCCGTGTCGTGGCCACCGC GGCCGATGATCTTGGCCGGA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ Domain Protein; DNAJ N-Terminal Domain-Containing Protein; DNAJ-Class Molecular Chaperone; DNAJ-Class Molecular Chaperone Protein
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTDSSTGAIRLVPLPGAAGLSAPQRSFNTLTKQVAARRARLRAWEAVWPAFQQRYLDEWVPLARAATGHEAELVRRLDVA FDMKGLTKAERALVSELVVAFARPLLDGDAADGLHEIHARHQRSRRGGEAAGAAPPHGRDRKRAGTADDDAAPARSEAPA AAAEDESDEAMMRHIQAELDAQEARAAAEAAARDAGRSQRRRASRRKSADAAAADDPAAQDGPDDAERAAAEAVPELPPV QISRSLRELYRRLASALHPDRETDPDEHARKTDLMQRLNRAYDRQDLLQLLELERDLNPAGADRLAGAGDELLQHYNGIL KAQLGALDRELHRVESDFRHGYGIGASAILAPDTALRTLGADIAALRRAVAQRERDLQAFRDLGSLKDWLRGFEA
Sequences:
>Translated_395_residues MTDSSTGAIRLVPLPGAAGLSAPQRSFNTLTKQVAARRARLRAWEAVWPAFQQRYLDEWVPLARAATGHEAELVRRLDVA FDMKGLTKAERALVSELVVAFARPLLDGDAADGLHEIHARHQRSRRGGEAAGAAPPHGRDRKRAGTADDDAAPARSEAPA AAAEDESDEAMMRHIQAELDAQEARAAAEAAARDAGRSQRRRASRRKSADAAAADDPAAQDGPDDAERAAAEAVPELPPV QISRSLRELYRRLASALHPDRETDPDEHARKTDLMQRLNRAYDRQDLLQLLELERDLNPAGADRLAGAGDELLQHYNGIL KAQLGALDRELHRVESDFRHGYGIGASAILAPDTALRTLGADIAALRRAVAQRERDLQAFRDLGSLKDWLRGFEA >Mature_394_residues TDSSTGAIRLVPLPGAAGLSAPQRSFNTLTKQVAARRARLRAWEAVWPAFQQRYLDEWVPLARAATGHEAELVRRLDVAF DMKGLTKAERALVSELVVAFARPLLDGDAADGLHEIHARHQRSRRGGEAAGAAPPHGRDRKRAGTADDDAAPARSEAPAA AAEDESDEAMMRHIQAELDAQEARAAAEAAARDAGRSQRRRASRRKSADAAAADDPAAQDGPDDAERAAAEAVPELPPVQ ISRSLRELYRRLASALHPDRETDPDEHARKTDLMQRLNRAYDRQDLLQLLELERDLNPAGADRLAGAGDELLQHYNGILK AQLGALDRELHRVESDFRHGYGIGASAILAPDTALRTLGADIAALRRAVAQRERDLQAFRDLGSLKDWLRGFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43067; Mature: 42936
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSSTGAIRLVPLPGAAGLSAPQRSFNTLTKQVAARRARLRAWEAVWPAFQQRYLDEWV CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLARAATGHEAELVRRLDVAFDMKGLTKAERALVSELVVAFARPLLDGDAADGLHEIHAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH HQRSRRGGEAAGAAPPHGRDRKRAGTADDDAAPARSEAPAAAAEDESDEAMMRHIQAELD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AQEARAAAEAAARDAGRSQRRRASRRKSADAAAADDPAAQDGPDDAERAAAEAVPELPPV HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH QISRSLRELYRRLASALHPDRETDPDEHARKTDLMQRLNRAYDRQDLLQLLELERDLNPA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC GADRLAGAGDELLQHYNGILKAQLGALDRELHRVESDFRHGYGIGASAILAPDTALRTLG CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH ADIAALRRAVAQRERDLQAFRDLGSLKDWLRGFEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDSSTGAIRLVPLPGAAGLSAPQRSFNTLTKQVAARRARLRAWEAVWPAFQQRYLDEWV CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLARAATGHEAELVRRLDVAFDMKGLTKAERALVSELVVAFARPLLDGDAADGLHEIHAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH HQRSRRGGEAAGAAPPHGRDRKRAGTADDDAAPARSEAPAAAAEDESDEAMMRHIQAELD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AQEARAAAEAAARDAGRSQRRRASRRKSADAAAADDPAAQDGPDDAERAAAEAVPELPPV HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH QISRSLRELYRRLASALHPDRETDPDEHARKTDLMQRLNRAYDRQDLLQLLELERDLNPA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC GADRLAGAGDELLQHYNGILKAQLGALDRELHRVESDFRHGYGIGASAILAPDTALRTLG CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH ADIAALRRAVAQRERDLQAFRDLGSLKDWLRGFEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA