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The map label for this gene is phnV [H]

Identifier: 238026693

GI number: 238026693

Start: 1146148

End: 1147137

Strand: Reverse

Name: phnV [H]

Synonym: bglu_1g10490

Alternate gene names: 238026693

Gene position: 1147137-1146148 (Counterclockwise)

Preceding gene: 238026694

Following gene: 238026692

Centisome position: 29.36

GC content: 74.34

Gene sequence:

>990_bases
ATGACACTGCCGCCCCCCGCCCCCGATGCGCTGGCCCCCGCCGGCGACGCGCCGCCCGCCCCCGCCGCCCCCGCCGGGCC
CGTGGCCCGCACCGCGGCGTCCGGCGTGCGGCCCACACCCCGGACGCGCCGCCGGCCCGGGTTCGGCGCGGCCATGCAAT
GGCTCGTCACGCTCGGCCTCTGCGCGTTCCTGATCGTGCCGGTGGTGATGTCGGTGCTCACCGGCCTGACCGTCAACGCG
TTCCGCGGCCTGTCGAGCGGGCTCACGCTGCATTGGCTGGCCGAGGTCTGGGCGCAGTATCGCGGCTCGGTGTGGCTGTC
GCTGGTGGTCGCGCTCGCCACGCTCGCCGTCACGCTGGTCACGGGCGTGCCGGCCGGCTATGCGCTCGCGCGCAGCCGCC
ACCGCGCGGCCCGCCTGATCGAGGAAGCGCTGGTGCTGCCGGTGGCGCTGCCGGGTCTGGCCTCGGCGCTCGGGCTGCTG
ATCGTCTATGGCGGCTGCGCCGCGTTCCGCGCCAGCCTCTGGTTCATCGTGGCCGGCCACGTCGTGTTCACGCTGCCGTT
CATGGTCCGCGCGGTGGCCGCCGTGGCCGCGCGCGCCGACCTGCGCACGCTCGAGGAGGGCGCGGCCAGCCTGGGCGCGA
CGTTCGCCACGCGCTTTGCGACCATCGTGCTGCCGAACCTGCGGCCCGGCATCGTGGCCGGCGCGCTCGCGGTGCTGACG
CTGTCGATCGGCGAATTCAACCTGACCTGGATGCTGCACACGCCCGACACCAAGACACTGCCGGTGGGCCTCGCCGACAC
CTATGCCTCGATGCGCATCGAGCTCGGCAGCGCCTATACGATCCTGTTCCTGCTGATGACGCTGCCGCTGCTGATGGCGA
TGCAATGGCTCGGCATCGATGCCGCCGGCTCGCGGATCGACGCCGCGCCGGCCGCCCGCCCGAAGCCCGCCGCAGCCGAT
TCCTTCCCGCCCGCCCCGCCATGCCGATGA

Upstream 100 bases:

>100_bases
GCGGGCCTGTCGATCGTGCTCGGCCTCGTCACCTGGGCGGTGCTCGCGATCGCACGCAGCCTGACCGGGCAGGCCGCCGC
TGCCGCATGAGACCACCGCG

Downstream 100 bases:

>100_bases
AACTCGCCTCCCTGCCCGTCACGCTCACGCGCTGTGCCAAGACGTTTCGCGCCACGCGCGTGCTCGAACCGCTCGATCTC
GCGATCGGAGCCGGCGAAAC

Product: Binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTLPPPAPDALAPAGDAPPAPAAPAGPVARTAASGVRPTPRTRRRPGFGAAMQWLVTLGLCAFLIVPVVMSVLTGLTVNA
FRGLSSGLTLHWLAEVWAQYRGSVWLSLVVALATLAVTLVTGVPAGYALARSRHRAARLIEEALVLPVALPGLASALGLL
IVYGGCAAFRASLWFIVAGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGATFATRFATIVLPNLRPGIVAGALAVLT
LSIGEFNLTWMLHTPDTKTLPVGLADTYASMRIELGSAYTILFLLMTLPLLMAMQWLGIDAAGSRIDAAPAARPKPAAAD
SFPPAPPCR

Sequences:

>Translated_329_residues
MTLPPPAPDALAPAGDAPPAPAAPAGPVARTAASGVRPTPRTRRRPGFGAAMQWLVTLGLCAFLIVPVVMSVLTGLTVNA
FRGLSSGLTLHWLAEVWAQYRGSVWLSLVVALATLAVTLVTGVPAGYALARSRHRAARLIEEALVLPVALPGLASALGLL
IVYGGCAAFRASLWFIVAGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGATFATRFATIVLPNLRPGIVAGALAVLT
LSIGEFNLTWMLHTPDTKTLPVGLADTYASMRIELGSAYTILFLLMTLPLLMAMQWLGIDAAGSRIDAAPAARPKPAAAD
SFPPAPPCR
>Mature_328_residues
TLPPPAPDALAPAGDAPPAPAAPAGPVARTAASGVRPTPRTRRRPGFGAAMQWLVTLGLCAFLIVPVVMSVLTGLTVNAF
RGLSSGLTLHWLAEVWAQYRGSVWLSLVVALATLAVTLVTGVPAGYALARSRHRAARLIEEALVLPVALPGLASALGLLI
VYGGCAAFRASLWFIVAGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGATFATRFATIVLPNLRPGIVAGALAVLTL
SIGEFNLTWMLHTPDTKTLPVGLADTYASMRIELGSAYTILFLLMTLPLLMAMQWLGIDAAGSRIDAAPAARPKPAAADS
FPPAPPCR

Specific function: Probably part of the phnSTUV complex (TC 3.A.1.11.5) involved in 2-aminoethylphosphonate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017661
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34175; Mature: 34044

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPPPAPDALAPAGDAPPAPAAPAGPVARTAASGVRPTPRTRRRPGFGAAMQWLVTLGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
CAFLIVPVVMSVLTGLTVNAFRGLSSGLTLHWLAEVWAQYRGSVWLSLVVALATLAVTLV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TGVPAGYALARSRHRAARLIEEALVLPVALPGLASALGLLIVYGGCAAFRASLWFIVAGH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFTLPFMVRAVAAVAARADLRTLEEGAASLGATFATRFATIVLPNLRPGIVAGALAVLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LSIGEFNLTWMLHTPDTKTLPVGLADTYASMRIELGSAYTILFLLMTLPLLMAMQWLGID
HHCCCEEEEEEEECCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
AAGSRIDAAPAARPKPAAADSFPPAPPCR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLPPPAPDALAPAGDAPPAPAAPAGPVARTAASGVRPTPRTRRRPGFGAAMQWLVTLGL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
CAFLIVPVVMSVLTGLTVNAFRGLSSGLTLHWLAEVWAQYRGSVWLSLVVALATLAVTLV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TGVPAGYALARSRHRAARLIEEALVLPVALPGLASALGLLIVYGGCAAFRASLWFIVAGH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFTLPFMVRAVAAVAARADLRTLEEGAASLGATFATRFATIVLPNLRPGIVAGALAVLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LSIGEFNLTWMLHTPDTKTLPVGLADTYASMRIELGSAYTILFLLMTLPLLMAMQWLGID
HHCCCEEEEEEEECCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
AAGSRIDAAPAARPKPAAADSFPPAPPCR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA