| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yncA [C]
Identifier: 238026589
GI number: 238026589
Start: 1012083
End: 1012577
Strand: Reverse
Name: yncA [C]
Synonym: bglu_1g09350
Alternate gene names: 238026589
Gene position: 1012577-1012083 (Counterclockwise)
Preceding gene: 238026590
Following gene: 238026583
Centisome position: 25.92
GC content: 68.69
Gene sequence:
>495_bases ATGAAATTCGAGATCCGCGACGCAGCCCCGAGCGACGTCGCGGCACTCATCGCGCTGACCCGCGAACTCGCCGAATTCGA GGCGCTGACGCATCTGTTCGTCGCGACCGAGGCCGATCTGGCCGATGCCCTGTTCGGGCCAAATCCGGCCGCCGGCGCGC TGGTGGCCACGCAAGAGGGCGACCTGATCGGCTATGCGCTCTACTTCCAGAACTACTCGACCTTCGTCGGCAAGCGCGGC CTCTATCTGGAGGATCTCTACGTGAAGCCGACGTGCCGCGGCACCGGGCTCGGCACGCGGCTGCTGCGCGCGGTTGCGGC GCTCGCGGTCGAACGCGGCTGCGGCCGCTTCGAGTGGACCGTGCTCGACTGGAATCGCCAGGCGATCGAATTCTACGAAC GGATGGGCGCGGTGGTGCTGCCCGACTGGCGCGTGGTGCGCGTGACGGGCGATGCGCTCGACGCGCTCGCGCAACCCCTG CGCGACGCCGACTGA
Upstream 100 bases:
>100_bases TCGGCTTCGTGCTGCTGTGGATCGCCTGCCATGCCTACAACTGGGTCGCGTCGCGCTTCGGCGGCATCGAGATCGTGCTG TCGGACGTGCCGGAGGAGGC
Downstream 100 bases:
>100_bases ACCTTTGAAACGAACGGCGGGCGCCGTCCCCCAGCCCCCGCCCTCGCCGTTCGCGCGCCGCCGGAGCCGGCACGCCGGCA CCGGCAGGCAGACACCATGC
Product: histone acetyltransferase HPA
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Diamine Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gnat Acetyltransferase; Sortase-Like Acyltransferase; Spermidine/Spermine N1-Acetyl Transferase; Gcn5-Related N-Acetyltransferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Argininosuccinate Synthase
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEGDLIGYALYFQNYSTFVGKRG LYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWTVLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPL RDAD
Sequences:
>Translated_164_residues MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEGDLIGYALYFQNYSTFVGKRG LYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWTVLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPL RDAD >Mature_164_residues MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEGDLIGYALYFQNYSTFVGKRG LYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWTVLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPL RDAD
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=164, Percent_Identity=39.0243902439024, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI4506789, Length=167, Percent_Identity=34.1317365269461, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17559148, Length=159, Percent_Identity=35.8490566037736, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24647013, Length=167, Percent_Identity=38.9221556886228, Blast_Score=93, Evalue=7e-20, Organism=Drosophila melanogaster, GI24647015, Length=111, Percent_Identity=43.2432432432432, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 17999; Mature: 17999
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEG CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCC DLIGYALYFQNYSTFVGKRGLYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWT CEEEEEEEECCHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE VLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPLRDAD EEECCHHHHHHHHHCCCEECCCCEEEEEECHHHHHHHHHHCCCC >Mature Secondary Structure MKFEIRDAAPSDVAALIALTRELAEFEALTHLFVATEADLADALFGPNPAAGALVATQEG CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCC DLIGYALYFQNYSTFVGKRGLYLEDLYVKPTCRGTGLGTRLLRAVAALAVERGCGRFEWT CEEEEEEEECCHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE VLDWNRQAIEFYERMGAVVLPDWRVVRVTGDALDALAQPLRDAD EEECCHHHHHHHHHCCCEECCCCEEEEEECHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA