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The map label for this gene is ydfF [H]

Identifier: 238026575

GI number: 238026575

Start: 997118

End: 997828

Strand: Reverse

Name: ydfF [H]

Synonym: bglu_1g09190

Alternate gene names: 238026575

Gene position: 997828-997118 (Counterclockwise)

Preceding gene: 238026578

Following gene: 238026574

Centisome position: 25.54

GC content: 74.82

Gene sequence:

>711_bases
ATGATCGCCACCGACCCGCACTTTCCCGGCCTGAGCCGGATCGGCGCGCTGCTCGCCGACCCGGCACGGGCGGCCATGCT
ATGGGCGCTGATGGACGGCAGCGCGCGCCCGGCCGGCGAACTCGCACGAATCGCCGGACTCTCGCCGTCGGCCGGCAGCG
CGCATCTCGCGCGCCTGACCGACGGCGGCCTGCTGGTGCCCGATGTGCGCGGCCGGCATCGCTATTACCGGATCGCCTCG
TCCGAGGTCGCCGCCTCGATCGAGGCGCTCGCGAATCTCGCGCAGGCCGCCGCGACCGCCAGGCCGCCCGAGGCCAGCCG
GCCCGCACGCACCGTGCCGCACGCGCTGCGCCACGCGCGCACCTGCTACGACCACATGGCGGGCGAACTCGCGGTGCAGC
TCTACGAACGCATGCTCGATGCCGGCTGGCTGAGCGCCGGCGCGCGCGAGGTCGAGGTCACACCGGCCGGCGCGGTGCAA
TTCGCGCGCTGGCAGATCGATCTGGGCCGCGAGCGGCAGCGCCGCCGGCGCTTCGCCTGCACCTGCCTCGACTGGAGCGA
ACGGCGCGCGCATCTGGCCGGCGCGCTCGGCGCCGCGCTGCTCGACGCGTTCCGCGCGCAGCACTGGATCGAGTCCGCCG
GCAAGCCGCGCCTGCTGCGCGTCACGCCGGAAGGACGGCGTCAGTTCGCACGCCTGCTTACCGCCGGTTGA

Upstream 100 bases:

>100_bases
CTCCGGCAGCGGACGCGCCTTCGACATTTCACGACGGCCAAAATCATCGAATCCGCGCCGCGCCTACACTGCTACCACCC
CCGCCCCACGGAGCCCGCCC

Downstream 100 bases:

>100_bases
CAGCGGATTTTCAGGCGGTTGACGAAGCACGCGCGGCGACATGGTTTGTTACAGGGATCGCGAGGCGCATTACAAAAGCG
GGCGTTCGGAAACATCGGGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIATDPHFPGLSRIGALLADPARAAMLWALMDGSARPAGELARIAGLSPSAGSAHLARLTDGGLLVPDVRGRHRYYRIAS
SEVAASIEALANLAQAAATARPPEASRPARTVPHALRHARTCYDHMAGELAVQLYERMLDAGWLSAGAREVEVTPAGAVQ
FARWQIDLGRERQRRRRFACTCLDWSERRAHLAGALGAALLDAFRAQHWIESAGKPRLLRVTPEGRRQFARLLTAG

Sequences:

>Translated_236_residues
MIATDPHFPGLSRIGALLADPARAAMLWALMDGSARPAGELARIAGLSPSAGSAHLARLTDGGLLVPDVRGRHRYYRIAS
SEVAASIEALANLAQAAATARPPEASRPARTVPHALRHARTCYDHMAGELAVQLYERMLDAGWLSAGAREVEVTPAGAVQ
FARWQIDLGRERQRRRRFACTCLDWSERRAHLAGALGAALLDAFRAQHWIESAGKPRLLRVTPEGRRQFARLLTAG
>Mature_236_residues
MIATDPHFPGLSRIGALLADPARAAMLWALMDGSARPAGELARIAGLSPSAGSAHLARLTDGGLLVPDVRGRHRYYRIAS
SEVAASIEALANLAQAAATARPPEASRPARTVPHALRHARTCYDHMAGELAVQLYERMLDAGWLSAGAREVEVTPAGAVQ
FARWQIDLGRERQRRRRFACTCLDWSERRAHLAGALGAALLDAFRAQHWIESAGKPRLLRVTPEGRRQFARLLTAG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25577; Mature: 25577

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATDPHFPGLSRIGALLADPARAAMLWALMDGSARPAGELARIAGLSPSAGSAHLARLT
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEC
DGGLLVPDVRGRHRYYRIASSEVAASIEALANLAQAAATARPPEASRPARTVPHALRHAR
CCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TCYDHMAGELAVQLYERMLDAGWLSAGAREVEVTPAGAVQFARWQIDLGRERQRRRRFAC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHEEECCCHHHHHHHHHHH
TCLDWSERRAHLAGALGAALLDAFRAQHWIESAGKPRLLRVTPEGRRQFARLLTAG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MIATDPHFPGLSRIGALLADPARAAMLWALMDGSARPAGELARIAGLSPSAGSAHLARLT
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEC
DGGLLVPDVRGRHRYYRIASSEVAASIEALANLAQAAATARPPEASRPARTVPHALRHAR
CCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TCYDHMAGELAVQLYERMLDAGWLSAGAREVEVTPAGAVQFARWQIDLGRERQRRRRFAC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHEEECCCHHHHHHHHHHH
TCLDWSERRAHLAGALGAALLDAFRAQHWIESAGKPRLLRVTPEGRRQFARLLTAG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]