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The map label for this gene is yhfN [H]

Identifier: 238026567

GI number: 238026567

Start: 987758

End: 989017

Strand: Reverse

Name: yhfN [H]

Synonym: bglu_1g09110

Alternate gene names: 238026567

Gene position: 989017-987758 (Counterclockwise)

Preceding gene: 238026569

Following gene: 238026566

Centisome position: 25.32

GC content: 68.57

Gene sequence:

>1260_bases
ATGTCCGCCCAACCGTTCACCCTGCTGTTCGCCGCCGCCATCCTCGCGATGGTCGGCACCAAGCTCTGGCTCGCCTCGCG
CCAGATCCGCTTCGTCGCCGCCCATCGGGCCAGCGTGCCGGGCCAGTTCCGCGAGACGATCACGCTGGTCGCGCACCAGC
GCGCGGCCGACTACACCGTGGCGCGCACGCGCCTGGCGATGCTCGAGGTGGTCGCGAGCGCCGTGGTGCTGATCGCGCTG
ACGCTGCTGGGCGGCGTGGGCGCGCTCGATCAGGCGCTGCGCGGCTGGCTCGGCGCCGGCTACGGCCAGCAGATCGCGCT
GATCGCGCTCGTGCTGCTGATCACGAGCGCGGTGGAACTGCCGTTCAACTATTACCGCCAGTTCGGCATCGAGGCCCGCT
TCGGCTTCAACCGCATGACGCGCCGGCTGTTCGTCACCGATCTCGTGCGCGGCACGCTGCTGGGCGCCGCGTTCGGCCTG
CCGCTGCTGTTCGTCGTGCTGTGGCTGATGAACCGCGCCGGCCCGCTCTGGTGGCTCTGGGCCTGGGTGGTCTGGACCGC
GTTCCAGCTGGTCGGGCAGGTGATCTTTCCCACCTTCATCGCGCCGCTGTTCAACAAATTCGAACCGCTCAGCGACGAGG
CGCTGCGCTCGCGCATCGAAGGCCTGATGAAGCGCTGCGGCTTCGCGGCGAAGGGGCTGTTCGTGATGGACGGCAGCCGC
CGCTCGGCGCACGGCAATGCCTATTTCTCGGGCTTCGGCGCGACCAAGCGCATCGTGTTCTTCGACACGCTGCTGGAGCG
GCTGTCGGGCAGCGAGATCGAGGCCGTGCTGGCCCACGAGCTCGGCCATTTCAAGCTGCGCCACGTGCTGAAGCGGATGA
TCGTCGCGTTCGCGCTGAGCCTCGTGCTGCTCGCGCTGCTCGGCTGGCTCGCGGGCCGCGTCTGGTTCTACACCGGGCTT
GGCGCATTGCCGTCGATGACGGGCAGCAACGCGGGCCTCGCGCTCGTGCTGTTCTTCCTCGCGCTGCCGGTGTTCCTGTT
CTTCGTCACGCCGCTGGGCAGCCTCAGCTCGCGCAAGCACGAGTTCGAGGCCGATGCGTTCGCGGCCAGCCAGACCGACA
AGCAGGACCTCGTCAACGCGCTCGTGAAGCTCTACCAGGACAACGCCTCGACGCTGACGCCCGACCCCGTCTACACCGCG
TTCTACTACTCGCATCCGCCGGCTTCGCAGCGGATCGATCGCCTGCTGCGGCACGCATGA

Upstream 100 bases:

>100_bases
GGCGGTGGCGAATGCGCCGCCAAGGCAGCCGAAGACCGATGAGCGGGCCCCGACCGCAAGAACATATAATTCTCGCATAG
ATACCACTGGCTCCCTTCCG

Downstream 100 bases:

>100_bases
CGCGCGGCCGCCAGAATGCGCCGGCCCGGCCGGCCAAAGCGGGCGCGCCCGGCGCCGGGCGCCTCGAAGGGCGCGTGATC
GCCGCGCACGGGCGCCATTA

Product: Subfamily M48A peptidase

Products: NA

Alternate protein names: PSP23 [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSAQPFTLLFAAAILAMVGTKLWLASRQIRFVAAHRASVPGQFRETITLVAHQRAADYTVARTRLAMLEVVASAVVLIAL
TLLGGVGALDQALRGWLGAGYGQQIALIALVLLITSAVELPFNYYRQFGIEARFGFNRMTRRLFVTDLVRGTLLGAAFGL
PLLFVVLWLMNRAGPLWWLWAWVVWTAFQLVGQVIFPTFIAPLFNKFEPLSDEALRSRIEGLMKRCGFAAKGLFVMDGSR
RSAHGNAYFSGFGATKRIVFFDTLLERLSGSEIEAVLAHELGHFKLRHVLKRMIVAFALSLVLLALLGWLAGRVWFYTGL
GALPSMTGSNAGLALVLFFLALPVFLFFVTPLGSLSSRKHEFEADAFAASQTDKQDLVNALVKLYQDNASTLTPDPVYTA
FYYSHPPASQRIDRLLRHA

Sequences:

>Translated_419_residues
MSAQPFTLLFAAAILAMVGTKLWLASRQIRFVAAHRASVPGQFRETITLVAHQRAADYTVARTRLAMLEVVASAVVLIAL
TLLGGVGALDQALRGWLGAGYGQQIALIALVLLITSAVELPFNYYRQFGIEARFGFNRMTRRLFVTDLVRGTLLGAAFGL
PLLFVVLWLMNRAGPLWWLWAWVVWTAFQLVGQVIFPTFIAPLFNKFEPLSDEALRSRIEGLMKRCGFAAKGLFVMDGSR
RSAHGNAYFSGFGATKRIVFFDTLLERLSGSEIEAVLAHELGHFKLRHVLKRMIVAFALSLVLLALLGWLAGRVWFYTGL
GALPSMTGSNAGLALVLFFLALPVFLFFVTPLGSLSSRKHEFEADAFAASQTDKQDLVNALVKLYQDNASTLTPDPVYTA
FYYSHPPASQRIDRLLRHA
>Mature_418_residues
SAQPFTLLFAAAILAMVGTKLWLASRQIRFVAAHRASVPGQFRETITLVAHQRAADYTVARTRLAMLEVVASAVVLIALT
LLGGVGALDQALRGWLGAGYGQQIALIALVLLITSAVELPFNYYRQFGIEARFGFNRMTRRLFVTDLVRGTLLGAAFGLP
LLFVVLWLMNRAGPLWWLWAWVVWTAFQLVGQVIFPTFIAPLFNKFEPLSDEALRSRIEGLMKRCGFAAKGLFVMDGSRR
SAHGNAYFSGFGATKRIVFFDTLLERLSGSEIEAVLAHELGHFKLRHVLKRMIVAFALSLVLLALLGWLAGRVWFYTGLG
ALPSMTGSNAGLALVLFFLALPVFLFFVTPLGSLSSRKHEFEADAFAASQTDKQDLVNALVKLYQDNASTLTPDPVYTAF
YYSHPPASQRIDRLLRHA

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI18379366, Length=457, Percent_Identity=29.9781181619256, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17505484, Length=438, Percent_Identity=28.9954337899543, Blast_Score=184, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6322577, Length=434, Percent_Identity=32.9493087557604, Blast_Score=219, Evalue=8e-58,
Organism=Drosophila melanogaster, GI19922414, Length=435, Percent_Identity=29.4252873563218, Blast_Score=187, Evalue=8e-48,
Organism=Drosophila melanogaster, GI78707252, Length=411, Percent_Identity=26.0340632603406, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI78707254, Length=411, Percent_Identity=26.0340632603406, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24654305, Length=297, Percent_Identity=28.956228956229, Blast_Score=105, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 46347; Mature: 46216

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQPFTLLFAAAILAMVGTKLWLASRQIRFVAAHRASVPGQFRETITLVAHQRAADYTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ARTRLAMLEVVASAVVLIALTLLGGVGALDQALRGWLGAGYGQQIALIALVLLITSAVEL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PFNYYRQFGIEARFGFNRMTRRLFVTDLVRGTLLGAAFGLPLLFVVLWLMNRAGPLWWLW
CHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AWVVWTAFQLVGQVIFPTFIAPLFNKFEPLSDEALRSRIEGLMKRCGFAAKGLFVMDGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCEEEECCCC
RSAHGNAYFSGFGATKRIVFFDTLLERLSGSEIEAVLAHELGHFKLRHVLKRMIVAFALS
CCCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLLALLGWLAGRVWFYTGLGALPSMTGSNAGLALVLFFLALPVFLFFVTPLGSLSSRKH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EFEADAFAASQTDKQDLVNALVKLYQDNASTLTPDPVYTAFYYSHPPASQRIDRLLRHA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SAQPFTLLFAAAILAMVGTKLWLASRQIRFVAAHRASVPGQFRETITLVAHQRAADYTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ARTRLAMLEVVASAVVLIALTLLGGVGALDQALRGWLGAGYGQQIALIALVLLITSAVEL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
PFNYYRQFGIEARFGFNRMTRRLFVTDLVRGTLLGAAFGLPLLFVVLWLMNRAGPLWWLW
CHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AWVVWTAFQLVGQVIFPTFIAPLFNKFEPLSDEALRSRIEGLMKRCGFAAKGLFVMDGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCEEEECCCC
RSAHGNAYFSGFGATKRIVFFDTLLERLSGSEIEAVLAHELGHFKLRHVLKRMIVAFALS
CCCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLLALLGWLAGRVWFYTGLGALPSMTGSNAGLALVLFFLALPVFLFFVTPLGSLSSRKH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EFEADAFAASQTDKQDLVNALVKLYQDNASTLTPDPVYTAFYYSHPPASQRIDRLLRHA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 3145906 [H]