Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026558

Identifier: 238026558

GI number: 238026558

Start: 980712

End: 981863

Strand: Reverse

Name: 238026558

Synonym: bglu_1g09020

Alternate gene names: NA

Gene position: 981863-980712 (Counterclockwise)

Preceding gene: 238026565

Following gene: 238026557

Centisome position: 25.13

GC content: 71.35

Gene sequence:

>1152_bases
ATGCGCCCGACCGTTTCCGCCCGCCGCCGTTCGCTCGCCGCCCTGCGCCGCTGCCTGCAGGCGGCCGGCGCCGCCTGTCT
CGCGCTCGCCGCGACCGCCGCCGACAGCCGCGCCGCCCCGCCCGTCGAGCGGCTGCGCGTACCGCCCGGCTTCCAGGTCG
AGCTGTTCGCCGCCGACGTGCCGACCGCACGCGAAATGGCCTGGTCGCCGCGCGGCGTCCTCTACGTCGGCTCGACCGAC
GGCGTCGTCCATGCGCTGACGGTCGACCGGGGCCGCGTCACCGGCCGCCACGTGGTTGCCTCCGGGCTCGATATGCCGGT
CGGCGTGGCTTACCGCGACGGCGCGCTCTACATCTCGGCGATCTCGCGAATCCTGCGGCTCGACGACATCGACGCGAAGC
TGGCCACGCCGCCCAAGCCGGTGGTGGTGACCGACGCGCTGCCGTCCGAGCGGCAGCACGGCTGGAAATTCATCGCGTTC
GGACCGGACGGCAAGCTCTATGTGCCGACCGGTGCGCCCTGCAACATCTGCGGGCCCGATCGCGACCGCTACGCGATGCT
CGGCCGGATGAACCCGGACGGCAGCGATTATCAAGTGTTCGCGCGCGGCATCCGCAACACCGTCGGCTTCGACTGGCATC
CGGCGACGCACGCGCTGTGGTTCACCGACAACGGCCGCGACATGCTCGGCGACGACGTGCCCGACGACGAGCTGAATTAC
GCGCCGCGCGCGGGCCTCGACTTCGGCTATCCGTATTGCCATGCCGGCGACGTGCCGGACCCGCAATACGGCAAGGGCCA
TCCATGCAGCAGCTTCACGCCGCCGGTGCTCAAGCTCGGCGCGCACGTGGCGGCGCTCGGCATGCGCTTCTACCGCGGTG
CGATGTTCCCGGCCGGGTATCGCGATGCGATCTTCATCGCCGAGCACGGTTCATGGAACCGCAGCAGCAAGGTCGGCTAT
CGCGTGGTGAGCGTGACCGCCGGGCCGGACGGCCGCGGCGCGCGCATGCAGGTGTTCGCGCAGGGCTGGCTGCAACCCGA
CGGCAGCGTCTGGGGCCGGCCCGCCGACGTGCTGCCGCTGCCGGACGGCTCGCTGCTCGTCAGCGACGATTACGCGGGCG
CGATCTATCGAATCACGTATACCGGGCACTGA

Upstream 100 bases:

>100_bases
GACGGCTCGCGAGGCGCTGCGGTGCAGCGCCTGCCGATCCGCGCGCAAGCTCCTACAATCCCGGCATGGTGCCTCGCGCA
CGCTCCCGCCCTGCTCCGCC

Downstream 100 bases:

>100_bases
CGGCGGCAGCGGAGCGCGGCTTTCGACGCGGCGTAGAATGAGGCAGGCGCTGCGGCCGCGGCGCCACGCCTTGCCCGCCT
CGCCTTTGCTATCGGATCTT

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD
GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF
GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY
APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY
RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH

Sequences:

>Translated_383_residues
MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD
GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF
GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY
APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY
RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH
>Mature_383_residues
MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADVPTAREMAWSPRGVLYVGSTD
GVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISAISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAF
GPDGKLYVPTGAPCNICGPDRDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY
APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGYRDAIFIAEHGSWNRSSKVGY
RVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYTGH

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 41320; Mature: 41320

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADV
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCC
PTAREMAWSPRGVLYVGSTDGVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISA
CCHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEECCEEEHHH
ISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAFGPDGKLYVPTGAPCNICGPD
HHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCCC
RDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC
APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RDAIFIAEHGSWNRSSKVGYRVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPL
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC
PDGSLLVSDDYAGAIYRITYTGH
CCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MRPTVSARRRSLAALRRCLQAAGAACLALAATAADSRAAPPVERLRVPPGFQVELFAADV
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCC
PTAREMAWSPRGVLYVGSTDGVVHALTVDRGRVTGRHVVASGLDMPVGVAYRDGALYISA
CCHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEECCEEEHHH
ISRILRLDDIDAKLATPPKPVVVTDALPSERQHGWKFIAFGPDGKLYVPTGAPCNICGPD
HHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCCC
RDRYAMLGRMNPDGSDYQVFARGIRNTVGFDWHPATHALWFTDNGRDMLGDDVPDDELNY
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC
APRAGLDFGYPYCHAGDVPDPQYGKGHPCSSFTPPVLKLGAHVAALGMRFYRGAMFPAGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RDAIFIAEHGSWNRSSKVGYRVVSVTAGPDGRGARMQVFAQGWLQPDGSVWGRPADVLPL
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC
PDGSLLVSDDYAGAIYRITYTGH
CCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]