| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tyrC [H]
Identifier: 238026533
GI number: 238026533
Start: 954845
End: 955771
Strand: Direct
Name: tyrC [H]
Synonym: bglu_1g08770
Alternate gene names: 238026533
Gene position: 954845-955771 (Clockwise)
Preceding gene: 238026532
Following gene: 238026534
Centisome position: 24.44
GC content: 73.46
Gene sequence:
>927_bases GTGTCTGATTTCTCGTTCAACAAACTGGTGATTTTCGGCGTCGGCCTGATCGGCGGTTCGCTCGCGCGCGCGCTGCGCGA GCGCGATGGCACGCGGGCCGGCCGCGTGATCGGCGTGGGGCGTTCGCCGGCCACGGTCGAGCGCGCGCGCGCGCTCGGCG TGGTCGATGCGATCGCCGCGCTCGACGATGTCGTGCAACTGCGCGAGGCGCTGGCGGGGGCCGACCTGGTGCTGCTCGCG GTGCCGGTCGCGCAGACCGGGCCGCTGCTCGAACGGATCGCGCCGCTGCTCGACGCGGCGACGGTCGTGACCGACGCGGG CAGCACCAAGTCCGACGTGGTCGCGGCCGCGCGCGCGGCCCTCGGCGAGCGCATCGCGCAGTTCGTGCCGGCCCACCCGA TCGCGGGCCGCGAGGCGAGCGGCGTCGAGGCCGCGCTGCCCGAGCTCTACGTCGGCCGCAACGTCGTGCTCTGCGCGCTG CCCGAGAATCCCCCCGGGGCGGTTGAGCGCGTCGCCGCGATGTGGCGCGCCACGGGCGCGGTGGTGCGCGAGATGGAGCC CGCGCAGCACGATCGCGTGTTTGCCGCGGTCAGCCATCTGCCGCATCTGCTGTCGTTCGCGCTCGTCGAGCAGATCCTCG GCGAAGCCGACGCCGAGCTGAAGTTTTCGTTCGCGGCGGGCGGGTTCCGCGATTTCACGCGGATCGCCGCTTCGAGCCCG GAGATGTGGCGCGACGTTTGCCTGGCGAACCGCGAGGCGCTGCTCGACGAGCTCGACGCCTACACCCGGGTGCTCGCGCG CTTGCGCGCGGCAATCGAGGCGGGCGACGCCGCCGCGCTCGAGGCAGTCTTCACCCGTTCGCGCGCCGCGCGCACGGCCT GGCAGGAGCGCGGCGGCAAAGCCGCCCCCGGTTCCGTTCAGTCATAA
Upstream 100 bases:
>100_bases TTGGCGACGATCCGCCGGCGCGGGTGCCGGCGGCGAGTGGTTCCATCGTGTTGCGCGCGGGTCGTTGCCGCGCGCCTTAC CCGGCTAACAGGCGGCTGCC
Downstream 100 bases:
>100_bases CAGGATCTTTATGGAATTCCTCGATATCGGCCCCTACTCCCGTGTGTCGGGCACGGTGCGTCTGCCCGGCTCCAAGAGCA TCTCGAACCGCGTGCTGCTG
Product: Prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLA VPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCAL PENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS
Sequences:
>Translated_308_residues MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLA VPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCAL PENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS >Mature_307_residues SDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLAV PVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALP ENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSPE MWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 32328; Mature: 32197
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAA CCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LDDVVQLREALAGADLVLLAVPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAA HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALPENPPGAVERVAAMWRATGA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH VVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC AAPGSVQS CCCCCCCC >Mature Secondary Structure SDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAA CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LDDVVQLREALAGADLVLLAVPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAA HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALPENPPGAVERVAAMWRATGA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH VVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC AAPGSVQS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]