| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026524
Identifier: 238026524
GI number: 238026524
Start: 945072
End: 945509
Strand: Reverse
Name: 238026524
Synonym: bglu_1g08680
Alternate gene names: NA
Gene position: 945509-945072 (Counterclockwise)
Preceding gene: 238026525
Following gene: 238026522
Centisome position: 24.2
GC content: 60.5
Gene sequence:
>438_bases ATGGGCATTTACGTCATTCAATACAAACAGGATCCGACCTACGTTCTGGGGGTCAACGACCAGATTGCGAATTCCCCGGT GGTGGTCCGCAAGCAAGGTACGCCGAATCGCTTCGTGCTGTGGGACATCAACTTCGATACCGGCGTGATCTCGCTTAACT CGAGCGGCGGCACGCTCGCGCTCGATCCGCAGGGTGATCGCGTCGCGCCAGAAGTCCCGCTGGTACTGGCGCCCGTCAAC CCTGCCGCGGCAGGCCAGCGCTACGACGTGATCACGAAGCCGAATTATCTCCTCAGCGTCGCGAACCACCAGCTCTGCAT CGACAACAAGGGGCGCGGCCTGAGCGACGGCAATCCGGTCTGGCTGTATCAGTTCAACGGATCGCCGGCGCAGCAATGGA ATCTGGTGCCGCTGATGAATCTGACGCTGGCAGTCTGA
Upstream 100 bases:
>100_bases GTATTCGAACTATGATTCCCTCCGCCGGGTCGATTCGATCCGACAGCGTCGATCCGACGACGCTTCACCCATAAAATCGC TACGAATCAGGAGTATAAAA
Downstream 100 bases:
>100_bases TCCTTTTTGCAAGCGCCGCAAGGCCAGCGGCGCCTGTCAATGAAGCCCGTTGAAGTCATTTTCATCGGGCGCTTTTTCTT TCCCATCCAGCGAAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGIYVIQYKQDPTYVLGVNDQIANSPVVVRKQGTPNRFVLWDINFDTGVISLNSSGGTLALDPQGDRVAPEVPLVLAPVN PAAAGQRYDVITKPNYLLSVANHQLCIDNKGRGLSDGNPVWLYQFNGSPAQQWNLVPLMNLTLAV
Sequences:
>Translated_145_residues MGIYVIQYKQDPTYVLGVNDQIANSPVVVRKQGTPNRFVLWDINFDTGVISLNSSGGTLALDPQGDRVAPEVPLVLAPVN PAAAGQRYDVITKPNYLLSVANHQLCIDNKGRGLSDGNPVWLYQFNGSPAQQWNLVPLMNLTLAV >Mature_144_residues GIYVIQYKQDPTYVLGVNDQIANSPVVVRKQGTPNRFVLWDINFDTGVISLNSSGGTLALDPQGDRVAPEVPLVLAPVNP AAAGQRYDVITKPNYLLSVANHQLCIDNKGRGLSDGNPVWLYQFNGSPAQQWNLVPLMNLTLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15788; Mature: 15657
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50231 RICIN_B_LECTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYVIQYKQDPTYVLGVNDQIANSPVVVRKQGTPNRFVLWDINFDTGVISLNSSGGTLA CCEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEE LDPQGDRVAPEVPLVLAPVNPAAAGQRYDVITKPNYLLSVANHQLCIDNKGRGLSDGNPV ECCCCCEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCCCCCCCE WLYQFNGSPAQQWNLVPLMNLTLAV EEEEECCCCCCEEEEEEEEEEEEEC >Mature Secondary Structure GIYVIQYKQDPTYVLGVNDQIANSPVVVRKQGTPNRFVLWDINFDTGVISLNSSGGTLA CEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEE LDPQGDRVAPEVPLVLAPVNPAAAGQRYDVITKPNYLLSVANHQLCIDNKGRGLSDGNPV ECCCCCEECCCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCCCCCCCE WLYQFNGSPAQQWNLVPLMNLTLAV EEEEECCCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA