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The map label for this gene is yddR [H]

Identifier: 238026520

GI number: 238026520

Start: 938340

End: 939116

Strand: Direct

Name: yddR [H]

Synonym: bglu_1g08640

Alternate gene names: 238026520

Gene position: 938340-939116 (Clockwise)

Preceding gene: 238026518

Following gene: 238026523

Centisome position: 24.02

GC content: 69.88

Gene sequence:

>777_bases
ATGACGATTTCGAACCTCTGCCTGACGCTGATCGGCGGCCCGACCGTATTGATCGAATTCGACGGCGTGCGACTACTGAC
CGATCCGACCTTCGACCCCCCCGGGCTTTACCAGGAAACGCCCGTGCGGTTTGAAAAGACCTCGGGGCCGGCCCTGCCGG
TCGAGGCGATCGGCGCACTCGACGCGGTGCTGCTGAGCCACGACCACCATTTCGACAACCTCGATCACGCGGGCCGTGCG
ATGTTGCCCGGCGTGCCGACGGTGCTGACGACGCAGGCCGGGGCCGGGCGCCTCGGCGGCAATGCGCGCGGCCTCGCGCC
GTTCGAGACCTGCACGCTCGACACGCGCGGCGGCCAGCGCCTGCTGGTGACGGCCACGCCGGCGCGCCACGGCCCGGTCG
GCATCGAGCCGTATTCGGGCGACGTGGTCGGCTTCGCGCTCGGCATCGAACAGCCAGGCGACCTGCTCTACGTGACGGGC
GACACGGTTTGGTATCACGGCACGGCCGAGGTGGCGGCGCGGTTCGCGCCGCGCGTGGTGGTGCTCTATACCGGTGCCGC
GGAGCCGCGCGGACGTTTTCACATGACGATGGGCAGCGAGGACGCGCTCGAGGCGGCCAGCGCGTTCCCCGACGCCGCGC
TGGTCGCGGTCCACAACGAAGGCTGGGCCCATTTGAAGGAAACGCATGCCCAGCTCGAGGACAGCTTCGCGAAGCTCGGG
GCCGGCGGGCGGCTGACCGCGCTCGAACGCGGCCTGCCATTGCGGATCGAATGGTGA

Upstream 100 bases:

>100_bases
ACTGTGCGAATTTGATCAGTCATTGTGTGAAATTGGGGAATTTTCGAACATTGCCGTGCAGCCTAGCATGAGGTCCTCGA
TAGCCAACCGGAACATTGCG

Downstream 100 bases:

>100_bases
CGCGCGTGAAGGACGACGGCAGCGCCGCGGCGCATGCGGCCGCCGCGGCCCGCGTGCCTCGTCCGTCACGGCCTCATGGC
TTCACGGCCTCATGGCTTCA

Product: beta-lactamase fold-like Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTISNLCLTLIGGPTVLIEFDGVRLLTDPTFDPPGLYQETPVRFEKTSGPALPVEAIGALDAVLLSHDHHFDNLDHAGRA
MLPGVPTVLTTQAGAGRLGGNARGLAPFETCTLDTRGGQRLLVTATPARHGPVGIEPYSGDVVGFALGIEQPGDLLYVTG
DTVWYHGTAEVAARFAPRVVVLYTGAAEPRGRFHMTMGSEDALEAASAFPDAALVAVHNEGWAHLKETHAQLEDSFAKLG
AGGRLTALERGLPLRIEW

Sequences:

>Translated_258_residues
MTISNLCLTLIGGPTVLIEFDGVRLLTDPTFDPPGLYQETPVRFEKTSGPALPVEAIGALDAVLLSHDHHFDNLDHAGRA
MLPGVPTVLTTQAGAGRLGGNARGLAPFETCTLDTRGGQRLLVTATPARHGPVGIEPYSGDVVGFALGIEQPGDLLYVTG
DTVWYHGTAEVAARFAPRVVVLYTGAAEPRGRFHMTMGSEDALEAASAFPDAALVAVHNEGWAHLKETHAQLEDSFAKLG
AGGRLTALERGLPLRIEW
>Mature_257_residues
TISNLCLTLIGGPTVLIEFDGVRLLTDPTFDPPGLYQETPVRFEKTSGPALPVEAIGALDAVLLSHDHHFDNLDHAGRAM
LPGVPTVLTTQAGAGRLGGNARGLAPFETCTLDTRGGQRLLVTATPARHGPVGIEPYSGDVVGFALGIEQPGDLLYVTGD
TVWYHGTAEVAARFAPRVVVLYTGAAEPRGRFHMTMGSEDALEAASAFPDAALVAVHNEGWAHLKETHAQLEDSFAKLGA
GGRLTALERGLPLRIEW

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27319; Mature: 27188

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISNLCLTLIGGPTVLIEFDGVRLLTDPTFDPPGLYQETPVRFEKTSGPALPVEAIGAL
CCHHHEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH
DAVLLSHDHHFDNLDHAGRAMLPGVPTVLTTQAGAGRLGGNARGLAPFETCTLDTRGGQR
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCE
LLVTATPARHGPVGIEPYSGDVVGFALGIEQPGDLLYVTGDTVWYHGTAEVAARFAPRVV
EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCHHHHHHHCCCEEE
VLYTGAAEPRGRFHMTMGSEDALEAASAFPDAALVAVHNEGWAHLKETHAQLEDSFAKLG
EEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHC
AGGRLTALERGLPLRIEW
CCCEEEHHHCCCCEEEEC
>Mature Secondary Structure 
TISNLCLTLIGGPTVLIEFDGVRLLTDPTFDPPGLYQETPVRFEKTSGPALPVEAIGAL
CHHHEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHH
DAVLLSHDHHFDNLDHAGRAMLPGVPTVLTTQAGAGRLGGNARGLAPFETCTLDTRGGQR
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCE
LLVTATPARHGPVGIEPYSGDVVGFALGIEQPGDLLYVTGDTVWYHGTAEVAARFAPRVV
EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCHHHHHHHCCCEEE
VLYTGAAEPRGRFHMTMGSEDALEAASAFPDAALVAVHNEGWAHLKETHAQLEDSFAKLG
EEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHC
AGGRLTALERGLPLRIEW
CCCEEEHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]