| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yqeB [C]
Identifier: 238026505
GI number: 238026505
Start: 918278
End: 919300
Strand: Reverse
Name: yqeB [C]
Synonym: bglu_1g08490
Alternate gene names: 238026505
Gene position: 919300-918278 (Counterclockwise)
Preceding gene: 238026506
Following gene: 238026504
Centisome position: 23.53
GC content: 71.65
Gene sequence:
>1023_bases ATGCAAACCTGGCTCACCGATGCCCAGCAACTGATCGCACACGGCGAAGCGGCCGTGCTCGTGACGGTCGCGCGCGCCGA AGGCTCGGTGCCGCGCGAGGCCGGCACCAAGATGCTCGTCACGCGCGACACCGCCCGCCACACGATCGGCGGCGGCCATC TCGAATGGAAGGCGATCGAGATCGCAAGGCAGTTGCTGAAGGACGGCTCGCACGTGTCGCACGCGCGCCGGCTCGAACGC ATGGCGCTCGGCCCCAGCCTCGGCCAGTGCTGTGGCGGCGCCGTGACGCTCGGCTTCGAGCGGCTCGACATCGCCGATCT CGGCTGGATCACCTCGCTCGCCAAGCGCGTGGCCGCCGGCAACGCCACCGTGCGCAGCGTGTCGTTCGGCCCGGCGGCCG ATCCGGTGATGCTGAGCGAGCCCGAGGCCGACGTGACGCGCGCCGACTGCCTGCTGTGGTCCACCGGCGACGTCTCGCTG ATGACCGAGACGATCGCGCCGCACAGCTTCGCGGTGATGCTGTTCGGCGCGAGCCACGCCGCGGCCGCGCTCACGCGCGT GCTCGCGACGCTGCCATGCCGGGTGCGCTGGATCGACGGGCGCGACGCGCCGTTCCCGCCCGCCGAGGCGCTCGCCGGCA TCGGCAACCTGACGGTGGAGGCGCGCGACGCGCCCGAACTCGCCGTCGCCGAAGCGGCGCCGCACACCTACTTCGTGGTG ATGACGCACGATCACGCGTTCGACTTCGTGCTGGCCCAGCACATCCTGCGCCGCGGCGACTATGCCTACTTCGGCATGAT CGGCTCGCGCACCAAGCGCCTCCAGTTCGATCAGCGCCTCGCCGCGAGCGGCATCGATCCCGCGCAGACCGCGCGGATGC GCTGCCCGATCGGCGTGGAAGGCATCCTCGACAAGGCCCCCGAGACGATCGCGATCTCGGTGGCCGCGCAACTGCTGCAG GTGGTCGACTCGCACGCCGCCCCGGCCCGGGCGGAAGGCGCAGCGGCCTCCCCTCAAATCTGA
Upstream 100 bases:
>100_bases GGCGCGCGGGCAGCGCCGGCCCGCGTGCCGCGCGCCCGCTCACTCTGCCTGCCGCCCGCCGCCCACGCGGCCGCGGCGTA CTGAGCGCGGAGGCGAACCC
Downstream 100 bases:
>100_bases CCGACCGACACCCAACCATGACCCCTGACTTCCGCAACAAGATCGCGCTCGCCCCGAAAGCCGAGCTGCACATCCACATC GAAGGCTCGCTGGAGCCGGA
Product: adenosine deaminase
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; XdhC Protein; Xanthine Dehydrogenase Accessory Protein Xdhc; Xanthine And CO Dehydrogenases Maturation Protein; Xanthine And CO Dehydrogenases Maturation Factor; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MQTWLTDAQQLIAHGEAAVLVTVARAEGSVPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARQLLKDGSHVSHARRLER MALGPSLGQCCGGAVTLGFERLDIADLGWITSLAKRVAAGNATVRSVSFGPAADPVMLSEPEADVTRADCLLWSTGDVSL MTETIAPHSFAVMLFGASHAAAALTRVLATLPCRVRWIDGRDAPFPPAEALAGIGNLTVEARDAPELAVAEAAPHTYFVV MTHDHAFDFVLAQHILRRGDYAYFGMIGSRTKRLQFDQRLAASGIDPAQTARMRCPIGVEGILDKAPETIAISVAAQLLQ VVDSHAAPARAEGAAASPQI
Sequences:
>Translated_340_residues MQTWLTDAQQLIAHGEAAVLVTVARAEGSVPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARQLLKDGSHVSHARRLER MALGPSLGQCCGGAVTLGFERLDIADLGWITSLAKRVAAGNATVRSVSFGPAADPVMLSEPEADVTRADCLLWSTGDVSL MTETIAPHSFAVMLFGASHAAAALTRVLATLPCRVRWIDGRDAPFPPAEALAGIGNLTVEARDAPELAVAEAAPHTYFVV MTHDHAFDFVLAQHILRRGDYAYFGMIGSRTKRLQFDQRLAASGIDPAQTARMRCPIGVEGILDKAPETIAISVAAQLLQ VVDSHAAPARAEGAAASPQI >Mature_340_residues MQTWLTDAQQLIAHGEAAVLVTVARAEGSVPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARQLLKDGSHVSHARRLER MALGPSLGQCCGGAVTLGFERLDIADLGWITSLAKRVAAGNATVRSVSFGPAADPVMLSEPEADVTRADCLLWSTGDVSL MTETIAPHSFAVMLFGASHAAAALTRVLATLPCRVRWIDGRDAPFPPAEALAGIGNLTVEARDAPELAVAEAAPHTYFVV MTHDHAFDFVLAQHILRRGDYAYFGMIGSRTKRLQFDQRLAASGIDPAQTARMRCPIGVEGILDKAPETIAISVAAQLLQ VVDSHAAPARAEGAAASPQI
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36116; Mature: 36116
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTWLTDAQQLIAHGEAAVLVTVARAEGSVPREAGTKMLVTRDTARHTIGGGHLEWKAIE CCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCEEEEEECCHHHCCCCCCEEHHHHH IARQLLKDGSHVSHARRLERMALGPSLGQCCGGAVTLGFERLDIADLGWITSLAKRVAAG HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHCCHHHHHHHHHHHHHHHCC NATVRSVSFGPAADPVMLSEPEADVTRADCLLWSTGDVSLMTETIAPHSFAVMLFGASHA CCEEEEEECCCCCCCEEECCCCCCCCHHHEEEECCCCCEEHHHHCCCCEEEEEEECCHHH AAALTRVLATLPCRVRWIDGRDAPFPPAEALAGIGNLTVEARDAPELAVAEAAPHTYFVV HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCEEHHHCCCCEEEEE MTHDHAFDFVLAQHILRRGDYAYFGMIGSRTKRLQFDQRLAASGIDPAQTARMRCPIGVE EECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCHH GILDKAPETIAISVAAQLLQVVDSHAAPARAEGAAASPQI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQTWLTDAQQLIAHGEAAVLVTVARAEGSVPREAGTKMLVTRDTARHTIGGGHLEWKAIE CCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCEEEEEECCHHHCCCCCCEEHHHHH IARQLLKDGSHVSHARRLERMALGPSLGQCCGGAVTLGFERLDIADLGWITSLAKRVAAG HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHCCHHHHHHHHHHHHHHHCC NATVRSVSFGPAADPVMLSEPEADVTRADCLLWSTGDVSLMTETIAPHSFAVMLFGASHA CCEEEEEECCCCCCCEEECCCCCCCCHHHEEEECCCCCEEHHHHCCCCEEEEEEECCHHH AAALTRVLATLPCRVRWIDGRDAPFPPAEALAGIGNLTVEARDAPELAVAEAAPHTYFVV HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCEEHHHCCCCEEEEE MTHDHAFDFVLAQHILRRGDYAYFGMIGSRTKRLQFDQRLAASGIDPAQTARMRCPIGVE EECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCHH GILDKAPETIAISVAAQLLQVVDSHAAPARAEGAAASPQI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA