| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is add [H]
Identifier: 238026504
GI number: 238026504
Start: 917235
End: 918260
Strand: Reverse
Name: add [H]
Synonym: bglu_1g08480
Alternate gene names: 238026504
Gene position: 918260-917235 (Counterclockwise)
Preceding gene: 238026505
Following gene: 238026503
Centisome position: 23.51
GC content: 66.96
Gene sequence:
>1026_bases ATGACCCCTGACTTCCGCAACAAGATCGCGCTCGCCCCGAAAGCCGAGCTGCACATCCACATCGAAGGCTCGCTGGAGCC GGAACTGATCTTCCAGCTCGCCAAGCGCAACGGCGTGAAGCTCGCCTACGACTCGATCGAGGCGCTGCGCGCGGCCTATG CGTTCACCGACCTGCAATCGTTCCTCGATATCTACTACGCCGGCGCGAGCGTGCTGCTGCACGAGCAGGACTTCTACGAC ATGACGGCCGCCTACGTCGAGCGGGCGCTGGCCGACAACGTGGTCCATGCCGAGATCTTCTTCGATCCGCAGACCCATAC CGAGCGCGGCGTGTCGATCGAGACGGTGGTGGCCGGCATCGACCGCGCGCTCGCCGACGCCGAACGGCGCGGCCTGTCGA GCCGGCTGATCCTCTGCTTCCTGCGCCACCTCTCCGAGGAGGACGCGCTCGCCACCTACGAAGCCGCGCTGCCGCTGTTC GAGCGGTACTCGCACCGGCTGATCGGCGTCGGCCTCGATTCGTCCGAGCGCGGCCACCCGCCCTCGAAGTTCGCGCGCGT GTTCGCCAAGGCTCGCGAACGCGGCCTGAAGCTGGTCGCGCACGCCGGCGAGGAGGGGCCGCCCGCCTATGTCATCGAGG CGCTCGACCTGCTCAAGGTGGATCGCGTCGATCACGGCGTGCGCAGCATCGAGGACGCCGAGCTGATCGCGCGGCTCGCC GACTCGCGCATCGCCTTGACGGTCTGCCCGCTGTCGAACCTGAAGCTGCGCGTGTTCGACGACATGGCCCAGCACACGCT GAAGCAGCTGCTCGACAGCGGCGTGGCCGTCACCATCAATTCCGACGATCCGGCCTACTTCGGCGGCTACGTCAACGACA ACTACTTCGCCACCGTCGCGGCGCTCGGCCTCGACGAACGCGAGGTCTACAGCGTGATCCGCAACGGCTTCGAAGCTTCG TTCATCGACGCGTCCGAACGCGCCGCGCGGATCGCGCAACTCGATTCGCACTGGCATCCGGCATGA
Upstream 100 bases:
>100_bases TGGCCGCGCAACTGCTGCAGGTGGTCGACTCGCACGCCGCCCCGGCCCGGGCGGAAGGCGCAGCGGCCTCCCCTCAAATC TGACCGACCGACACCCAACC
Downstream 100 bases:
>100_bases CGCCCGCGTCCTGCCGAGGAAGCCGGTGCATCCGCTCCGCGCGGCATCGCGCGGACGCACCGTCGTCCCCATAACAGAGA CTGAGGAGAGCTTTCCCGAT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTPDFRNKIALAPKAELHIHIEGSLEPELIFQLAKRNGVKLAYDSIEALRAAYAFTDLQSFLDIYYAGASVLLHEQDFYD MTAAYVERALADNVVHAEIFFDPQTHTERGVSIETVVAGIDRALADAERRGLSSRLILCFLRHLSEEDALATYEAALPLF ERYSHRLIGVGLDSSERGHPPSKFARVFAKARERGLKLVAHAGEEGPPAYVIEALDLLKVDRVDHGVRSIEDAELIARLA DSRIALTVCPLSNLKLRVFDDMAQHTLKQLLDSGVAVTINSDDPAYFGGYVNDNYFATVAALGLDEREVYSVIRNGFEAS FIDASERAARIAQLDSHWHPA
Sequences:
>Translated_341_residues MTPDFRNKIALAPKAELHIHIEGSLEPELIFQLAKRNGVKLAYDSIEALRAAYAFTDLQSFLDIYYAGASVLLHEQDFYD MTAAYVERALADNVVHAEIFFDPQTHTERGVSIETVVAGIDRALADAERRGLSSRLILCFLRHLSEEDALATYEAALPLF ERYSHRLIGVGLDSSERGHPPSKFARVFAKARERGLKLVAHAGEEGPPAYVIEALDLLKVDRVDHGVRSIEDAELIARLA DSRIALTVCPLSNLKLRVFDDMAQHTLKQLLDSGVAVTINSDDPAYFGGYVNDNYFATVAALGLDEREVYSVIRNGFEAS FIDASERAARIAQLDSHWHPA >Mature_340_residues TPDFRNKIALAPKAELHIHIEGSLEPELIFQLAKRNGVKLAYDSIEALRAAYAFTDLQSFLDIYYAGASVLLHEQDFYDM TAAYVERALADNVVHAEIFFDPQTHTERGVSIETVVAGIDRALADAERRGLSSRLILCFLRHLSEEDALATYEAALPLFE RYSHRLIGVGLDSSERGHPPSKFARVFAKARERGLKLVAHAGEEGPPAYVIEALDLLKVDRVDHGVRSIEDAELIARLAD SRIALTVCPLSNLKLRVFDDMAQHTLKQLLDSGVAVTINSDDPAYFGGYVNDNYFATVAALGLDEREVYSVIRNGFEASF IDASERAARIAQLDSHWHPA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=338, Percent_Identity=25.7396449704142, Blast_Score=119, Evalue=4e-27, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=28.2208588957055, Blast_Score=129, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17538512, Length=345, Percent_Identity=22.8985507246377, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI32565969, Length=345, Percent_Identity=22.8985507246377, Blast_Score=78, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=44.4108761329305, Blast_Score=285, Evalue=5e-78, Organism=Drosophila melanogaster, GI24645260, Length=322, Percent_Identity=22.9813664596273, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37839; Mature: 37708
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDFRNKIALAPKAELHIHIEGSLEPELIFQLAKRNGVKLAYDSIEALRAAYAFTDLQS CCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLHEQDFYDMTAAYVERALADNVVHAEIFFDPQTHTERGVSIETVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH DRALADAERRGLSSRLILCFLRHLSEEDALATYEAALPLFERYSHRLIGVGLDSSERGHP HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PSKFARVFAKARERGLKLVAHAGEEGPPAYVIEALDLLKVDRVDHGVRSIEDAELIARLA HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSRIALTVCPLSNLKLRVFDDMAQHTLKQLLDSGVAVTINSDDPAYFGGYVNDNYFATVA CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCEEEHH ALGLDEREVYSVIRNGFEASFIDASERAARIAQLDSHWHPA HHCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TPDFRNKIALAPKAELHIHIEGSLEPELIFQLAKRNGVKLAYDSIEALRAAYAFTDLQS CCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLHEQDFYDMTAAYVERALADNVVHAEIFFDPQTHTERGVSIETVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH DRALADAERRGLSSRLILCFLRHLSEEDALATYEAALPLFERYSHRLIGVGLDSSERGHP HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC PSKFARVFAKARERGLKLVAHAGEEGPPAYVIEALDLLKVDRVDHGVRSIEDAELIARLA HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSRIALTVCPLSNLKLRVFDDMAQHTLKQLLDSGVAVTINSDDPAYFGGYVNDNYFATVA CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCCEEEHH ALGLDEREVYSVIRNGFEASFIDASERAARIAQLDSHWHPA HHCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA