| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is purP [H]
Identifier: 238026503
GI number: 238026503
Start: 915760
End: 917136
Strand: Reverse
Name: purP [H]
Synonym: bglu_1g08470
Alternate gene names: 238026503
Gene position: 917136-915760 (Counterclockwise)
Preceding gene: 238026504
Following gene: 238026502
Centisome position: 23.48
GC content: 67.76
Gene sequence:
>1377_bases ATGGACACGTACAACGGCAGCAAGGCCCCGGCCACGAGTTCGTGGCTCGACCGATTCTTCGGCATCCGCGAGTCCGGCTC GCGGCTGCGCACGGAAATCGTCGCGGGCGTCACGACGTTCCTGACGGCGATGTACATCATCGTCGTCAATCCCGGCATCC TGTCTCAGGCAGGCGTGCCGTTCGCGTCGGCGCTGACCGCCACCGTGATCGTCAGCTTCCTCGGCAGTTGCGCGATGGGC CTGTACGCACGCAATCCGGTGCTGGTCGCGCCGGGCATGGGCATGAACGCGTTGTTCGCGTTCGTGATGGTCCACGGCGG CAGGATGCCGTGGCAGACCGCGCTCGGCTGCGTGTTCTGGGCCGGCGTGATCTTCGCCGTGCTGGCCGCGTTCAACGCGC GCAAGCTGGTGGTGGACGCGATCCCGCCCAACCTGCGGCACGCCGTGTCGTGCGGCATCGGCCTCTTCATCTGCCTGATC GGGCTCGTCAACGCGAAGTTCGTGGTGGGCGATCCGGTGACCGTCGTGCATGCGGCGTCGCTGAACCCGGTGATCGTGAC GTTCCTCGCCGGGCTCGCGATCACCACCGTGCTGGTGGTGCGCCGCGTGACGGGCGCGCTGATGATCGGCATCGTCGCCA CCACGCTGCTGGCGGTGCCGATCGGCCGGATCTGGGGCGACGGCAGCGCCTACTGGCCCGCCGCGATCGCCACCCGGACG CTGGTGAACTGGAACGGCCTGGTGGCGGTGCCCGACTTCTCCGGAATCGGCCAGCTCGACCTGCTCGGCGCGCTCAAGGT GGCCTACTGGCCGTTCATCTTCGTGATGCTGTTCACCGCCTTCTTCGACGCGCTGTCCACCTTCATGGCGATCTCGGAGG CCGGCAACCTGGTCGATCGCGACGGCAATCCGCGCAACATTCGCCAGTCGATGATGGTGGACGCGTTCTCGGCGTTGGTC TCGGCGCCGCTCGGCACGAGCCCCGCGAACGCCTACATCGAGTCGGCCGCCGGCATCTCGGCGGGCGGGCGCACCGGCCT CGTGGCGGTGGTGGCCGGGCTCTGCTTCCTGCCGTTCCTCGTGCTCTCGCCGCTGCTCTCGCTGGTGCCCGCGATCGCCA CCGCGCCCGCGCTAATCCTGGTGGGCGTGTTCATGATGGAGTCGATCACGAAGATCGAATGGCACCGCTTCGACGAGGCG ATCCCCGCCTTCATCGCGATGGTGCTGATCCCGCTCACCTACTCGATCACCGACGGCATCGCCTACGGCTTCCTCGCGTT CGTGGTGCTGAAGCTGTTCACCGGGCGCCGCCGCGAAATCAAGCCGGCGATGTGGATCGTCGCCGCGCTTTCGGGCGTGC TGCTCGCGCAGCTTTGA
Upstream 100 bases:
>100_bases GACGCCCGCGTCCTGCCGAGGAAGCCGGTGCATCCGCTCCGCGCGGCATCGCGCGGACGCACCGTCGTCCCCATAACAGA GACTGAGGAGAGCTTTCCCG
Downstream 100 bases:
>100_bases GGCCGCCGGTGCGCCCCGTTCATCTGTCGCAGGAGTTTCGCCCATGACCCAATCCGCGTTTCGCGCCCGGCTGCTGACGT TTCGCGGCGACCCCGCGCAC
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MDTYNGSKAPATSSWLDRFFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFASALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFAFVMVHGGRMPWQTALGCVFWAGVIFAVLAAFNARKLVVDAIPPNLRHAVSCGIGLFICLI GLVNAKFVVGDPVTVVHAASLNPVIVTFLAGLAITTVLVVRRVTGALMIGIVATTLLAVPIGRIWGDGSAYWPAAIATRT LVNWNGLVAVPDFSGIGQLDLLGALKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLVDRDGNPRNIRQSMMVDAFSALV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFLPFLVLSPLLSLVPAIATAPALILVGVFMMESITKIEWHRFDEA IPAFIAMVLIPLTYSITDGIAYGFLAFVVLKLFTGRRREIKPAMWIVAALSGVLLAQL
Sequences:
>Translated_458_residues MDTYNGSKAPATSSWLDRFFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFASALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFAFVMVHGGRMPWQTALGCVFWAGVIFAVLAAFNARKLVVDAIPPNLRHAVSCGIGLFICLI GLVNAKFVVGDPVTVVHAASLNPVIVTFLAGLAITTVLVVRRVTGALMIGIVATTLLAVPIGRIWGDGSAYWPAAIATRT LVNWNGLVAVPDFSGIGQLDLLGALKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLVDRDGNPRNIRQSMMVDAFSALV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFLPFLVLSPLLSLVPAIATAPALILVGVFMMESITKIEWHRFDEA IPAFIAMVLIPLTYSITDGIAYGFLAFVVLKLFTGRRREIKPAMWIVAALSGVLLAQL >Mature_458_residues MDTYNGSKAPATSSWLDRFFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFASALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFAFVMVHGGRMPWQTALGCVFWAGVIFAVLAAFNARKLVVDAIPPNLRHAVSCGIGLFICLI GLVNAKFVVGDPVTVVHAASLNPVIVTFLAGLAITTVLVVRRVTGALMIGIVATTLLAVPIGRIWGDGSAYWPAAIATRT LVNWNGLVAVPDFSGIGQLDLLGALKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLVDRDGNPRNIRQSMMVDAFSALV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFLPFLVLSPLLSLVPAIATAPALILVGVFMMESITKIEWHRFDEA IPAFIAMVLIPLTYSITDGIAYGFLAFVVLKLFTGRRREIKPAMWIVAALSGVLLAQL
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=451, Percent_Identity=38.8026607538803, Blast_Score=304, Evalue=7e-84, Organism=Escherichia coli, GI87082309, Length=453, Percent_Identity=39.0728476821192, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI1790499, Length=442, Percent_Identity=37.3303167420815, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI48994909, Length=458, Percent_Identity=34.9344978165939, Blast_Score=238, Evalue=7e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 48375; Mature: 48375
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTYNGSKAPATSSWLDRFFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVP CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC FASALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFAFVMVHGGRMPWQTALGCVFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGVIFAVLAAFNARKLVVDAIPPNLRHAVSCGIGLFICLIGLVNAKFVVGDPVTVVHAAS HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECC LNPVIVTFLAGLAITTVLVVRRVTGALMIGIVATTLLAVPIGRIWGDGSAYWPAAIATRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LVNWNGLVAVPDFSGIGQLDLLGALKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLVDR HCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGNPRNIRQSMMVDAFSALVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFLPFL CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VLSPLLSLVPAIATAPALILVGVFMMESITKIEWHRFDEAIPAFIAMVLIPLTYSITDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGFLAFVVLKLFTGRRREIKPAMWIVAALSGVLLAQL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTYNGSKAPATSSWLDRFFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVP CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC FASALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFAFVMVHGGRMPWQTALGCVFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGVIFAVLAAFNARKLVVDAIPPNLRHAVSCGIGLFICLIGLVNAKFVVGDPVTVVHAAS HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECC LNPVIVTFLAGLAITTVLVVRRVTGALMIGIVATTLLAVPIGRIWGDGSAYWPAAIATRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LVNWNGLVAVPDFSGIGQLDLLGALKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLVDR HCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGNPRNIRQSMMVDAFSALVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFLPFL CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VLSPLLSLVPAIATAPALILVGVFMMESITKIEWHRFDEAIPAFIAMVLIPLTYSITDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGFLAFVVLKLFTGRRREIKPAMWIVAALSGVLLAQL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]