| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is guaD [H]
Identifier: 238026502
GI number: 238026502
Start: 914403
End: 915716
Strand: Reverse
Name: guaD [H]
Synonym: bglu_1g08460
Alternate gene names: 238026502
Gene position: 915716-914403 (Counterclockwise)
Preceding gene: 238026503
Following gene: 238026500
Centisome position: 23.44
GC content: 72.68
Gene sequence:
>1314_bases ATGACCCAATCCGCGTTTCGCGCCCGGCTGCTGACGTTTCGCGGCGACCCCGCGCACACCGACGAGGCCGCCGTCTTCGA GGAGGACGGCCTGCTGATCGTCGATGCGGCGGGCCGGGTGGTCGCGGCCGGCGCCCACGCGGCGCTGGCCGGCCGCCTCG CGCCCGATGCGCAGGTCACCACGCTCGGCGACAAGCTGATCGTGCCCGGCTTCATCGACGCGCACGTCCACTATCCGCAG ACCGACATGATCGCCTCGCCGGCGCCGGGCCTGCTGCCGTGGCTCGACACCTACACGTTCCCGACCGAGCGGCGCTTCGC GGACCCCGAGCATGCGCGCGAGGTGGCCTCGTTCTTCATCGACACGCTGCTGGCGAGCGGCACCACCACCGCGCTCGTCT ACTGCACGGTCCACCGGCAGTCGGCCGAGGCGCTGTTCGAGGCGAGCGAGGCGAAGAACCTGCGGATGGCCGCGGGCAAG GTGCTGATGGACCGCAACTGCCCCGAGTTCCTGCGCGACACGGCGCAGTCGGGCCACGACGACAGCGCCGCGCTGATCGA GCGCTGGCACGGCCGCGGCCGGCAGATGTACGCGCTCACGCCGCGCTTCGCGCCGACCTCGACGCCGGCCCAGCTCGAGG CCTGCGCCGCGCTCGCGCGCCGTCATCCCGACGTGTTCGTGCAGAGCCACGTGGCCGAGAACGTCGACGAGGTGAAGTGG GCCGCCGAGCTGTTCCCCGGACACCGCAGCTATCTCGACATCTACGATCGCCACGGCCTGCTGCGCCCGCGTGCCGTCTA CGGCCACTGCATCCACCTCGACGACGAGGACCGGCGCCGGATCGCCGAGACCGGCACGGTGATCGCGCATTGCCCGACCT CGAACTTGTTCCTGGGCAGCGGCCTGTTCGATTTCGACCGCGCCACCGCGCAGCGCGTGCAGTTGTCGCTCGCCACCGAT GTCGGCGGCGGCACCTCGTTCTCGATGCTGCAGACCATGAACGAGGCGCACAAGATCGCGCGGCTGTCAGGCCATCACCT CAGCGCGACGCGGATGTTCTGGCTCGCCACGGCGGGCGCCGCGCGCGCGCTCGCGCTCGACGCGCAGGTCGGCACCCTCG CGCCGCGCGCCGAGGCCGACTTCGTGGTGCTCGACCCGCGCGCCACGCCGCTGCTCGCGCGCCGCACCGCGCGCGCCGCC TCGCTGGAGGAACTGCTGTTCGCGTTCGCGATGCTTGGCGACGACCGCGCGGTCCACAGCACCTGGTCGGCCGGCCGCTG CGTGCATCGGCGCGGCGAGGCCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases AAGCCGGCGATGTGGATCGTCGCCGCGCTTTCGGGCGTGCTGCTCGCGCAGCTTTGAGGCCGCCGGTGCGCCCCGTTCAT CTGTCGCAGGAGTTTCGCCC
Downstream 100 bases:
>100_bases GCCGCGGCGCAACGGCGCCGGCAACGGCGCAGCCGCGTCCGGACATGAGAAAGGCCCGCTGCGATCCCTCGCACCGGGCC TTTCTCATGGGTTGCCGCCG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTQSAFRARLLTFRGDPAHTDEAAVFEEDGLLIVDAAGRVVAAGAHAALAGRLAPDAQVTTLGDKLIVPGFIDAHVHYPQ TDMIASPAPGLLPWLDTYTFPTERRFADPEHAREVASFFIDTLLASGTTTALVYCTVHRQSAEALFEASEAKNLRMAAGK VLMDRNCPEFLRDTAQSGHDDSAALIERWHGRGRQMYALTPRFAPTSTPAQLEACAALARRHPDVFVQSHVAENVDEVKW AAELFPGHRSYLDIYDRHGLLRPRAVYGHCIHLDDEDRRRIAETGTVIAHCPTSNLFLGSGLFDFDRATAQRVQLSLATD VGGGTSFSMLQTMNEAHKIARLSGHHLSATRMFWLATAGAARALALDAQVGTLAPRAEADFVVLDPRATPLLARRTARAA SLEELLFAFAMLGDDRAVHSTWSAGRCVHRRGEAAAA
Sequences:
>Translated_437_residues MTQSAFRARLLTFRGDPAHTDEAAVFEEDGLLIVDAAGRVVAAGAHAALAGRLAPDAQVTTLGDKLIVPGFIDAHVHYPQ TDMIASPAPGLLPWLDTYTFPTERRFADPEHAREVASFFIDTLLASGTTTALVYCTVHRQSAEALFEASEAKNLRMAAGK VLMDRNCPEFLRDTAQSGHDDSAALIERWHGRGRQMYALTPRFAPTSTPAQLEACAALARRHPDVFVQSHVAENVDEVKW AAELFPGHRSYLDIYDRHGLLRPRAVYGHCIHLDDEDRRRIAETGTVIAHCPTSNLFLGSGLFDFDRATAQRVQLSLATD VGGGTSFSMLQTMNEAHKIARLSGHHLSATRMFWLATAGAARALALDAQVGTLAPRAEADFVVLDPRATPLLARRTARAA SLEELLFAFAMLGDDRAVHSTWSAGRCVHRRGEAAAA >Mature_436_residues TQSAFRARLLTFRGDPAHTDEAAVFEEDGLLIVDAAGRVVAAGAHAALAGRLAPDAQVTTLGDKLIVPGFIDAHVHYPQT DMIASPAPGLLPWLDTYTFPTERRFADPEHAREVASFFIDTLLASGTTTALVYCTVHRQSAEALFEASEAKNLRMAAGKV LMDRNCPEFLRDTAQSGHDDSAALIERWHGRGRQMYALTPRFAPTSTPAQLEACAALARRHPDVFVQSHVAENVDEVKWA AELFPGHRSYLDIYDRHGLLRPRAVYGHCIHLDDEDRRRIAETGTVIAHCPTSNLFLGSGLFDFDRATAQRVQLSLATDV GGGTSFSMLQTMNEAHKIARLSGHHLSATRMFWLATAGAARALALDAQVGTLAPRAEADFVVLDPRATPLLARRTARAAS LEELLFAFAMLGDDRAVHSTWSAGRCVHRRGEAAAA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=439, Percent_Identity=30.5239179954442, Blast_Score=203, Evalue=3e-52, Organism=Escherichia coli, GI1789249, Length=417, Percent_Identity=48.2014388489209, Blast_Score=435, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319963, Length=417, Percent_Identity=30.6954436450839, Blast_Score=191, Evalue=1e-49, Organism=Drosophila melanogaster, GI24643849, Length=448, Percent_Identity=32.3660714285714, Blast_Score=211, Evalue=9e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 47549; Mature: 47418
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSAFRARLLTFRGDPAHTDEAAVFEEDGLLIVDAAGRVVAAGAHAALAGRLAPDAQVT CCCHHHHHEEEEECCCCCCCCCCEEEECCCEEEEECCCCEEECCCHHHHHCCCCCCCEEE TLGDKLIVPGFIDAHVHYPQTDMIASPAPGLLPWLDTYTFPTERRFADPEHAREVASFFI ECCCCEECCCEEECEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHH DTLLASGTTTALVYCTVHRQSAEALFEASEAKNLRMAAGKVLMDRNCPEFLRDTAQSGHD HHHHHCCCCEEEEEEEEECHHHHHHHHHHHHCCHHHHHCHHEECCCCHHHHHHHHHCCCC DSAALIERWHGRGRQMYALTPRFAPTSTPAQLEACAALARRHPDVFVQSHVAENVDEVKW CHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH AAELFPGHRSYLDIYDRHGLLRPRAVYGHCIHLDDEDRRRIAETGTVIAHCPTSNLFLGS HHHHCCCCCHHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHHCCCEEEECCCCCEEEEC GLFDFDRATAQRVQLSLATDVGGGTSFSMLQTMNEAHKIARLSGHHLSATRMFWLATAGA CCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCC ARALALDAQVGTLAPRAEADFVVLDPRATPLLARRTARAASLEELLFAFAMLGDDRAVHS CEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC TWSAGRCVHRRGEAAAA CCCCCHHHHHCCCCCCC >Mature Secondary Structure TQSAFRARLLTFRGDPAHTDEAAVFEEDGLLIVDAAGRVVAAGAHAALAGRLAPDAQVT CCHHHHHEEEEECCCCCCCCCCEEEECCCEEEEECCCCEEECCCHHHHHCCCCCCCEEE TLGDKLIVPGFIDAHVHYPQTDMIASPAPGLLPWLDTYTFPTERRFADPEHAREVASFFI ECCCCEECCCEEECEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHH DTLLASGTTTALVYCTVHRQSAEALFEASEAKNLRMAAGKVLMDRNCPEFLRDTAQSGHD HHHHHCCCCEEEEEEEEECHHHHHHHHHHHHCCHHHHHCHHEECCCCHHHHHHHHHCCCC DSAALIERWHGRGRQMYALTPRFAPTSTPAQLEACAALARRHPDVFVQSHVAENVDEVKW CHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHH AAELFPGHRSYLDIYDRHGLLRPRAVYGHCIHLDDEDRRRIAETGTVIAHCPTSNLFLGS HHHHCCCCCHHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHHCCCEEEECCCCCEEEEC GLFDFDRATAQRVQLSLATDVGGGTSFSMLQTMNEAHKIARLSGHHLSATRMFWLATAGA CCCHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCC ARALALDAQVGTLAPRAEADFVVLDPRATPLLARRTARAASLEELLFAFAMLGDDRAVHS CEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC TWSAGRCVHRRGEAAAA CCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]