| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is trxB [H]
Identifier: 238026468
GI number: 238026468
Start: 875548
End: 876507
Strand: Reverse
Name: trxB [H]
Synonym: bglu_1g08120
Alternate gene names: 238026468
Gene position: 876507-875548 (Counterclockwise)
Preceding gene: 238026479
Following gene: 238026467
Centisome position: 22.44
GC content: 66.56
Gene sequence:
>960_bases ATGTCCACCAAACACGCGAAAGTTCTGATTCTCGGTTCCGGCCCCGCCGGCTACACGGCCGCCGTCTACGCCGCGCGCGC CAATCTGTCGCCGCTGCTCATCACGGGCATCGCGCAGGGCGGCCAGCTGATGACTACGACCGACGTCGAAAACTGGCCCG CGGACCCGAACGGCGTGCAAGGCCCGGAGCTGATGCAGCGTTTCCTCGAGCACGCGGAGCGCTTCAACACGGAAATCGTG TTCGATCACATCCACACCGCCCGGCTCGACGAGAAGCCGATCCGCCTGATCGGCGATTCCGGCGAATACACCTGCGACGC GCTGATCATCTCGACCGGCGCCTCGGCGCAGTACCTCGGGCTCGCCTCGGAGGAGGCGTTCATGGGCAAGGGCGTGTCGG CCTGCGCGACCTGCGACGGCTTCTTCTACCGCAACCAGGACGTGGCCGTGATCGGCGGCGGCAACACGGCCGTCGAGGAA GCGCTCTACCTGACCGGGATCGCGAAGAAGGTCACCGTGATCCACCGCCGCGACAAGTTCCGCGCCGAGCCGATCCTGAT CGACCGGCTGCTCGAGAAGGAAAAGGAAGGCAAGGTCGAGATCAAGTGGAACCACGTGCTCGACGAGGTCACGGGCGACG ATTCGGGCGTCACCGGCGTGAGGATCAAGCACACCGGCACGGGCGAGACCGAGCAGATCGCGCTGCAGGGCGTGTTCGTG GCGATCGGCCACAAGCCGAACACCGACATCTTCCAGGGCCAGCTCGAGATGAAGGACGGCTACATCGTCACCAAGAGCGG CCTGGCGGGCAACGCCACGGCCACCAGCGTCCCGGGCGTGTTCGCGGCCGGCGACGTGCAGGATCACATCTACCGGCAGG CCATCACCAGCGCCGGCACGGGCTGCATGGCCGCGCTCGACGCACAGCGCTACCTCGAGAGCCTGCACGACGCGAACTGA
Upstream 100 bases:
>100_bases GCCGGTGCGCCGCCGCTGTCTCGCGCCGCCCCGGCCCGCTTGCCCCTCGCCGCACGCCGCGTCATCCCGACCGTCCGGCC GCTTTTTACGGATCCTGCAC
Downstream 100 bases:
>100_bases GCGGCGCGGCGCGCGGCGACGCTACAATGAAGCCGCCGCGCACCGCACGCCCACCGCAGTCCGCCGGCCCGCCGACGTCC GCTGACGCCGCCGTGCCGGC
Product: Thioredoxin-disulfide reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSTKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADPNGVQGPELMQRFLEHAERFNTEIV FDHIHTARLDEKPIRLIGDSGEYTCDALIISTGASAQYLGLASEEAFMGKGVSACATCDGFFYRNQDVAVIGGGNTAVEE ALYLTGIAKKVTVIHRRDKFRAEPILIDRLLEKEKEGKVEIKWNHVLDEVTGDDSGVTGVRIKHTGTGETEQIALQGVFV AIGHKPNTDIFQGQLEMKDGYIVTKSGLAGNATATSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDAN
Sequences:
>Translated_319_residues MSTKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADPNGVQGPELMQRFLEHAERFNTEIV FDHIHTARLDEKPIRLIGDSGEYTCDALIISTGASAQYLGLASEEAFMGKGVSACATCDGFFYRNQDVAVIGGGNTAVEE ALYLTGIAKKVTVIHRRDKFRAEPILIDRLLEKEKEGKVEIKWNHVLDEVTGDDSGVTGVRIKHTGTGETEQIALQGVFV AIGHKPNTDIFQGQLEMKDGYIVTKSGLAGNATATSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDAN >Mature_318_residues STKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADPNGVQGPELMQRFLEHAERFNTEIVF DHIHTARLDEKPIRLIGDSGEYTCDALIISTGASAQYLGLASEEAFMGKGVSACATCDGFFYRNQDVAVIGGGNTAVEEA LYLTGIAKKVTVIHRRDKFRAEPILIDRLLEKEKEGKVEIKWNHVLDEVTGDDSGVTGVRIKHTGTGETEQIALQGVFVA IGHKPNTDIFQGQLEMKDGYIVTKSGLAGNATATSVPGVFAAGDVQDHIYRQAITSAGTGCMAALDAQRYLESLHDAN
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=318, Percent_Identity=69.811320754717, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI87081763, Length=312, Percent_Identity=34.2948717948718, Blast_Score=137, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6320560, Length=324, Percent_Identity=48.1481481481481, Blast_Score=283, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6321898, Length=322, Percent_Identity=46.583850931677, Blast_Score=275, Evalue=1e-74,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34149; Mature: 34018
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADPNGVQ CCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC GPELMQRFLEHAERFNTEIVFDHIHTARLDEKPIRLIGDSGEYTCDALIISTGASAQYLG CHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEE LASEEAFMGKGVSACATCDGFFYRNQDVAVIGGGNTAVEEALYLTGIAKKVTVIHRRDKF CCCCHHHHCCCCCHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCC RAEPILIDRLLEKEKEGKVEIKWNHVLDEVTGDDSGVTGVRIKHTGTGETEQIALQGVFV CCCHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEE AIGHKPNTDIFQGQLEMKDGYIVTKSGLAGNATATSVPGVFAAGDVQDHIYRQAITSAGT EECCCCCCCCEECEEEECCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC GCMAALDAQRYLESLHDAN CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STKHAKVLILGSGPAGYTAAVYAARANLSPLLITGIAQGGQLMTTTDVENWPADPNGVQ CCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC GPELMQRFLEHAERFNTEIVFDHIHTARLDEKPIRLIGDSGEYTCDALIISTGASAQYLG CHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEE LASEEAFMGKGVSACATCDGFFYRNQDVAVIGGGNTAVEEALYLTGIAKKVTVIHRRDKF CCCCHHHHCCCCCHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCC RAEPILIDRLLEKEKEGKVEIKWNHVLDEVTGDDSGVTGVRIKHTGTGETEQIALQGVFV CCCHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEE AIGHKPNTDIFQGQLEMKDGYIVTKSGLAGNATATSVPGVFAAGDVQDHIYRQAITSAGT EECCCCCCCCEECEEEECCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC GCMAALDAQRYLESLHDAN CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]