| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026448
Identifier: 238026448
GI number: 238026448
Start: 849946
End: 851067
Strand: Direct
Name: 238026448
Synonym: bglu_1g07900
Alternate gene names: NA
Gene position: 849946-851067 (Clockwise)
Preceding gene: 238026446
Following gene: 238026454
Centisome position: 21.76
GC content: 71.48
Gene sequence:
>1122_bases ATGAACGCTTGGTTATCGTGGCGTCCCTCCGAACGGCATGCGCAGTTGCTGCGTGAAGTGCTGCGCCGGGGGACGCGTGT CAGCCACCATCTTTTCAGCGTCGTCGGCGGCCTGGCCGTGGTCGTCGCGTTCGCGCTCTGGATGTTGCCGAACGCTCGCG GCACGCTGGCCGCAAAGCTGATGCCGGTGCTGTCGGCCGCCGTCAAGGCGGGGCCGGCACGGCTGCTGTCCGGACACCCG CTGCCCGCGTTCGGTCCCGGCAATGCCGATGAGGACGTCGACGCCGACGGCTCGCCGGTCTCGCCGGTGTCCTATGCCCC GTCCGGCCCGGCCGCGGGCGACGTCGCCACGGCCGACGACGCGGGCCGCAACGGCCAGTCGCCGGTGACGCTGGCGAAGC TGATCCCGGCCCAGCGCGTCGCGGCCGACGCGCGCGATGACCGCGTATTCACGAGCCGCGAGCAGGCGCTCGTCGCCACC TATCTCGCGCGCCGCTACCACGTCGCGCAGGAGCCGGTCGGCCAGCTGGTGAAGGCCGCGTTCCAGACCGGTCACGACAT CGGCCTCGATCCGATGCTGCTGCTGGCGGTGATGGCGATCGAATCGGGCTTCAATCCCTATGCGGAAAGCGGGGTCGGCG CGCAAGGGCTGATGCAGGTGATGTCGAAGATCCATTCCGACAAGTTCGAATATGCGGGCGGCACCGACGCGGCGCTGCGC CCGGTCGTCAACATCCAGGTCGGCGCACTGGTGTTGAAGGACTGCATCGCGCGCGGCGGCTCGCTGGCGGGCGGCCTGCG CCTGTACAACGGCGTGACGGGCACCGACGACGGCGGCTACAGCGCGAAGGTGCTGGCCGAGCGCGGCCGGCTGCGCGACG TCGCGCGCGGCCGCAACGTGTCGATCTACGCGCCGCAGTTGCCGGCCCCGGTCACCACCGCGGCCTCGGGCTCGTCGTCC GCGCCGGCCGCTGGCCAGAAGCGCGTGCAGGCGACGCTCGACGGCGCGCACCCGATCGCGATCAAGGCGAGCGCGCCGGT CGACGCGAAGACCTCGTCGCAGTCCGACGCGAGCGCCGATACGGGCGCCAAGCACGACGGTTCGTCGGAAGTCGGCACCT GA
Upstream 100 bases:
>100_bases CCGCCCGATCCGGGCGAGCAACGTCCTGATTCCGCGGCCACGCGTCCTTCTCGCTACCGAGTCGAGCGAGCCGCACGAGT CATGTTCATGGGAGATCTGA
Downstream 100 bases:
>100_bases GCGGCCGGGCCGTTCCGGCGGCCACGGCAACCAGCAAGGCAAACAGGGCACCTTCGGTGCCCTGTTCTCTTTGGCGGCCG CGCGGCCGAATCGGGGCTTA
Product: transglycosylase, SLT family
Products: NA
Alternate protein names: Transglycosylase; Transglycosylase SLT Family Protein; Transglycosylase SLT Family; Lytic Transglycosylase; Transglycosylase SLT Domain-Containing Lipoprotein; Transmembrane Protein; Transglycosylase Protein; Transglycosylase SLT Domain-Containing; Transmembrane Transglycosylase SLT Family Protein
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNAWLSWRPSERHAQLLREVLRRGTRVSHHLFSVVGGLAVVVAFALWMLPNARGTLAAKLMPVLSAAVKAGPARLLSGHP LPAFGPGNADEDVDADGSPVSPVSYAPSGPAAGDVATADDAGRNGQSPVTLAKLIPAQRVAADARDDRVFTSREQALVAT YLARRYHVAQEPVGQLVKAAFQTGHDIGLDPMLLLAVMAIESGFNPYAESGVGAQGLMQVMSKIHSDKFEYAGGTDAALR PVVNIQVGALVLKDCIARGGSLAGGLRLYNGVTGTDDGGYSAKVLAERGRLRDVARGRNVSIYAPQLPAPVTTAASGSSS APAAGQKRVQATLDGAHPIAIKASAPVDAKTSSQSDASADTGAKHDGSSEVGT
Sequences:
>Translated_373_residues MNAWLSWRPSERHAQLLREVLRRGTRVSHHLFSVVGGLAVVVAFALWMLPNARGTLAAKLMPVLSAAVKAGPARLLSGHP LPAFGPGNADEDVDADGSPVSPVSYAPSGPAAGDVATADDAGRNGQSPVTLAKLIPAQRVAADARDDRVFTSREQALVAT YLARRYHVAQEPVGQLVKAAFQTGHDIGLDPMLLLAVMAIESGFNPYAESGVGAQGLMQVMSKIHSDKFEYAGGTDAALR PVVNIQVGALVLKDCIARGGSLAGGLRLYNGVTGTDDGGYSAKVLAERGRLRDVARGRNVSIYAPQLPAPVTTAASGSSS APAAGQKRVQATLDGAHPIAIKASAPVDAKTSSQSDASADTGAKHDGSSEVGT >Mature_373_residues MNAWLSWRPSERHAQLLREVLRRGTRVSHHLFSVVGGLAVVVAFALWMLPNARGTLAAKLMPVLSAAVKAGPARLLSGHP LPAFGPGNADEDVDADGSPVSPVSYAPSGPAAGDVATADDAGRNGQSPVTLAKLIPAQRVAADARDDRVFTSREQALVAT YLARRYHVAQEPVGQLVKAAFQTGHDIGLDPMLLLAVMAIESGFNPYAESGVGAQGLMQVMSKIHSDKFEYAGGTDAALR PVVNIQVGALVLKDCIARGGSLAGGLRLYNGVTGTDDGGYSAKVLAERGRLRDVARGRNVSIYAPQLPAPVTTAASGSSS APAAGQKRVQATLDGAHPIAIKASAPVDAKTSSQSDASADTGAKHDGSSEVGT
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38460; Mature: 38460
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWLSWRPSERHAQLLREVLRRGTRVSHHLFSVVGGLAVVVAFALWMLPNARGTLAAKL CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MPVLSAAVKAGPARLLSGHPLPAFGPGNADEDVDADGSPVSPVSYAPSGPAAGDVATADD HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGRNGQSPVTLAKLIPAQRVAADARDDRVFTSREQALVATYLARRYHVAQEPVGQLVKAA CCCCCCCCHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQTGHDIGLDPMLLLAVMAIESGFNPYAESGVGAQGLMQVMSKIHSDKFEYAGGTDAALR HHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH PVVNIQVGALVLKDCIARGGSLAGGLRLYNGVTGTDDGGYSAKVLAERGRLRDVARGRNV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE SIYAPQLPAPVTTAASGSSSAPAAGQKRVQATLDGAHPIAIKASAPVDAKTSSQSDASAD EEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC TGAKHDGSSEVGT CCCCCCCCCCCCC >Mature Secondary Structure MNAWLSWRPSERHAQLLREVLRRGTRVSHHLFSVVGGLAVVVAFALWMLPNARGTLAAKL CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH MPVLSAAVKAGPARLLSGHPLPAFGPGNADEDVDADGSPVSPVSYAPSGPAAGDVATADD HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGRNGQSPVTLAKLIPAQRVAADARDDRVFTSREQALVATYLARRYHVAQEPVGQLVKAA CCCCCCCCHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQTGHDIGLDPMLLLAVMAIESGFNPYAESGVGAQGLMQVMSKIHSDKFEYAGGTDAALR HHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH PVVNIQVGALVLKDCIARGGSLAGGLRLYNGVTGTDDGGYSAKVLAERGRLRDVARGRNV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE SIYAPQLPAPVTTAASGSSSAPAAGQKRVQATLDGAHPIAIKASAPVDAKTSSQSDASAD EEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC TGAKHDGSSEVGT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA