| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238026438
Identifier: 238026438
GI number: 238026438
Start: 837930
End: 838571
Strand: Reverse
Name: 238026438
Synonym: bglu_1g07760
Alternate gene names: NA
Gene position: 838571-837930 (Counterclockwise)
Preceding gene: 238026444
Following gene: 238026437
Centisome position: 21.47
GC content: 53.12
Gene sequence:
>642_bases ATGAGCATCGATCCAAGCATCCTAGACGGCTTCGGCGTCTCAGAAAAAGATATACACTCGTTCGTCACGTCGAACGCCGG CCTCTGCGGCATCGACGTTTCCCGCCTCAGCAAATTCTTGCTCGTTCAGCTGACAAGCGCGTGGAAGCATCGGTCCTGGA ACACGTTCGCGGTCGCTGACGTGATCCAACGCATTGAAGGCCGCAGCCCCTACCCCAGCAAGACAGCAAAACCCCGCCAG TTCAAAGGTGATGCTCTGCGCGGACTGTGGAAGGTGCACTTCGTTGATACTCGATTTCTGCTTCGAAATATCTACAACGA ATGGGAAATGTTCAGCACGAAAAGCGATAAATTCGAAAAATTGTGCGCTCGAGTTACCGCAGCCGAGGAAGAAAGCCCGT CTCCGCTGGGCAGGCAGGGCCGCCTAGCGCATGAGTTCGTAATGGGGGGATACACACAGCGAACATCCAAGCAGAAGTTG ACGGGCGAGTGGCTAATCTTCGGCATACGCGAACAAAAGAACATTTATCTTGCCCTCTGCACTCACTCCGGCAGCCCAGA ACAGGACCGCGAAATCTACGATACCCTGTTGAAGCTATGCGGGAACGATTTTCCCGATATTTTCACAAAATCATCCGGAT AA
Upstream 100 bases:
>100_bases CGTCTTGGTGTAGCGTGTCGTCCATGCGACGACTATCCTCAAACAACATGATGCGGGCAACGGCTAGGTCGTTCGCCCAT CCGCGTGGGACATATAGTTC
Downstream 100 bases:
>100_bases ACGTTACATCACCGCAAAGCAATTGCAACACTCCAATTAAATTAATTTATCAAATCACAAATTAAAAAGTTTCCGAAAAT CAGGGGATTTCCAATCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSIDPSILDGFGVSEKDIHSFVTSNAGLCGIDVSRLSKFLLVQLTSAWKHRSWNTFAVADVIQRIEGRSPYPSKTAKPRQ FKGDALRGLWKVHFVDTRFLLRNIYNEWEMFSTKSDKFEKLCARVTAAEEESPSPLGRQGRLAHEFVMGGYTQRTSKQKL TGEWLIFGIREQKNIYLALCTHSGSPEQDREIYDTLLKLCGNDFPDIFTKSSG
Sequences:
>Translated_213_residues MSIDPSILDGFGVSEKDIHSFVTSNAGLCGIDVSRLSKFLLVQLTSAWKHRSWNTFAVADVIQRIEGRSPYPSKTAKPRQ FKGDALRGLWKVHFVDTRFLLRNIYNEWEMFSTKSDKFEKLCARVTAAEEESPSPLGRQGRLAHEFVMGGYTQRTSKQKL TGEWLIFGIREQKNIYLALCTHSGSPEQDREIYDTLLKLCGNDFPDIFTKSSG >Mature_212_residues SIDPSILDGFGVSEKDIHSFVTSNAGLCGIDVSRLSKFLLVQLTSAWKHRSWNTFAVADVIQRIEGRSPYPSKTAKPRQF KGDALRGLWKVHFVDTRFLLRNIYNEWEMFSTKSDKFEKLCARVTAAEEESPSPLGRQGRLAHEFVMGGYTQRTSKQKLT GEWLIFGIREQKNIYLALCTHSGSPEQDREIYDTLLKLCGNDFPDIFTKSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24189; Mature: 24058
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDPSILDGFGVSEKDIHSFVTSNAGLCGIDVSRLSKFLLVQLTSAWKHRSWNTFAVAD CCCCCCHHCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH VIQRIEGRSPYPSKTAKPRQFKGDALRGLWKVHFVDTRFLLRNIYNEWEMFSTKSDKFEK HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LCARVTAAEEESPSPLGRQGRLAHEFVMGGYTQRTSKQKLTGEWLIFGIREQKNIYLALC HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHCCHHHCCCCEEEEEEECCCCEEEEEE THSGSPEQDREIYDTLLKLCGNDFPDIFTKSSG ECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure SIDPSILDGFGVSEKDIHSFVTSNAGLCGIDVSRLSKFLLVQLTSAWKHRSWNTFAVAD CCCCCHHCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH VIQRIEGRSPYPSKTAKPRQFKGDALRGLWKVHFVDTRFLLRNIYNEWEMFSTKSDKFEK HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LCARVTAAEEESPSPLGRQGRLAHEFVMGGYTQRTSKQKLTGEWLIFGIREQKNIYLALC HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHCCHHHCCCCEEEEEEECCCCEEEEEE THSGSPEQDREIYDTLLKLCGNDFPDIFTKSSG ECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA