| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ytwF [H]
Identifier: 238026430
GI number: 238026430
Start: 829464
End: 829793
Strand: Reverse
Name: ytwF [H]
Synonym: bglu_1g07650
Alternate gene names: 238026430
Gene position: 829793-829464 (Counterclockwise)
Preceding gene: 238026431
Following gene: 238026429
Centisome position: 21.24
GC content: 69.7
Gene sequence:
>330_bases ATGCCGATGCAGATCCTGACCGCCCCCGCGCTGGCCGCCTGGCTCGCCGATCCGTCGCGCCCCGCGCCCGTCGTGCTCGA CGTGCGCGAACCATGGGAGGTCGCGACCGCGAGCCTCGCCGGCAGCGTGTCGATCCCGATGCAGCAGATCCCCGCGCGCA GCGAGGAACTCGATGACGAGGCCGAGATCGTCTGCGTCTGCCATCACGGCATGCGCAGCGCGCAGGTCGCGATGTTCCTC GAATCGCGCGGCTTCACGAAGCTCTACAACCTGCAAGGCGGCATCGACGCGTGGTCGCGCGACGTCGACCCTTCGGTGCC GCGCTACTGA
Upstream 100 bases:
>100_bases TCCGCGTCGCCGACGTGTTCGAAACCTACGTCGACCACCTCGTCAACGCGATGGAGCCGTCGCGCTTCCGCTTCTGATTC CCGCTGACCCGCTCACGCCC
Downstream 100 bases:
>100_bases TGCACCGGTGTCGCGCCGTGCCGCGACGCCCACGGTAGCCGATCCCGCGACGCCGCGGCCCTGACCGGCCGCGGCGTCGG CGCTTTCGGGCCACGCGGTT
Product: Rhodanese domain-containing protein
Products: H+; Sulfite; Thiocyanate [C]
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPMQILTAPALAAWLADPSRPAPVVLDVREPWEVATASLAGSVSIPMQQIPARSEELDDEAEIVCVCHHGMRSAQVAMFL ESRGFTKLYNLQGGIDAWSRDVDPSVPRY
Sequences:
>Translated_109_residues MPMQILTAPALAAWLADPSRPAPVVLDVREPWEVATASLAGSVSIPMQQIPARSEELDDEAEIVCVCHHGMRSAQVAMFL ESRGFTKLYNLQGGIDAWSRDVDPSVPRY >Mature_108_residues PMQILTAPALAAWLADPSRPAPVVLDVREPWEVATASLAGSVSIPMQQIPARSEELDDEAEIVCVCHHGMRSAQVAMFLE SRGFTKLYNLQGGIDAWSRDVDPSVPRY
Specific function: Catalyzes, Although With Low Efficiency, The Sulfur Transfer Reaction From Thiosulfate To Cyanide. The Relatively Low Affinity Of Glpe For Both Thiosulfate And Cyanide Suggests That These Compounds Are Not The Physiological Substrates. Thioredoxin 1 Or Re
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: 2.8.1.1 [C]
Molecular weight: Translated: 11934; Mature: 11803
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQILTAPALAAWLADPSRPAPVVLDVREPWEVATASLAGSVSIPMQQIPARSEELDDE CCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCC AEIVCVCHHGMRSAQVAMFLESRGFTKLYNLQGGIDAWSRDVDPSVPRY CCEEEEECCCCCCHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMQILTAPALAAWLADPSRPAPVVLDVREPWEVATASLAGSVSIPMQQIPARSEELDDE CCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCC AEIVCVCHHGMRSAQVAMFLESRGFTKLYNLQGGIDAWSRDVDPSVPRY CCEEEEECCCCCCHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cyanide; Thiosulfate [C]
Specific reaction: Cyanide + Thiosulfate --> H+ + Sulfite + Thiocyanate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]