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The map label for this gene is nahR [H]

Identifier: 238026370

GI number: 238026370

Start: 760064

End: 761038

Strand: Reverse

Name: nahR [H]

Synonym: bglu_1g07040

Alternate gene names: 238026370

Gene position: 761038-760064 (Counterclockwise)

Preceding gene: 238026371

Following gene: 238026364

Centisome position: 19.48

GC content: 72.51

Gene sequence:

>975_bases
ATGCCAACCGACGACGACACCGCCGACTCCCGCACCGACTCGCTCGACATCTGGCTCGTGCGGGTGCTGCGCACGCTGCT
GCTGGAGCGCAGCGTGACCCAGGCCGCGCTGCGCCTGAACCAGACGCAGCCGGCCATCAGCACGGCGCTGCGGCGCCTGC
GCGCCGTGCTGAACGATCCGATCCTGGTGCGCGGCAAATCGGGCATGGTGCCGACCGAGTACGGCGCGTCGCTGCTGGAG
GCCGCGCAGCGCGCGCTGCGCGACGTCGACTTCATCGCCACGCCGCACGGCGACTTCGATCCGGCTAGCTCGCGCCGCAC
CTTCCGGCTGGCCGCGCCCGACTATCTGAACGACTTCTTCATGCCGACGCTGATCGCGCGGTTTCGCGAGGCGGCCCCGC
TCGCGCGCCTCGAGCTCGATTCGCTGAACCCGGCGCTCGATCATGCCGGCGCGCTCGACTCGGGCGCGCTGGACCTGGTG
ATCGCGAACTGGCCGCGGCCCGATCCGCGCTTCGCGCGCAGCGACCTGTTCCCCGACACCGTGGTGTGCCTGATGCGCGA
GACGCACCCGCTCGCGCACGCGCCGCTCACGCGCGAGGCCTACGCGGCGGCGGCCCATCTCGCGCCGACGCCTTACACGG
GCGGGGCGCGCAACGCGATCGAGATCGGCCTCGCGCGCGCGAAGCTCGAGCGCCGCGTGGTGACGACGCTGCCCTACTTC
GGCGTGATCCCGCAGGTGCTGCTGCAGTCGGACCTGATCTTCACCACCACCCGCCGCTTCGCCGAGCATTACGCCCGGAT
GCTGCCGCTCGTGATGCTCGCGCCGCCCGTGTCGTTCCCGCGCATCCGGTGCTATCAGCTCGCCCACCCGCAGCCGGACC
GGCCGTCCGACCTCGCCTGGTTGCGCGCGCTCGTGAAGTCGGTGTCGGATTCGCTGACCACGCGGCCGCGCGCGCGGCAC
CAGGCGGGGCGCTGA

Upstream 100 bases:

>100_bases
TGATCGCGGCAAGCCGCGCCGATACCGCGGATAACCGGCCGGCCCGCGCCCCGGCCGCGCGCCCCGATATCCTTGGCGCG
ACGCCCTCGACGCCCCGCCG

Downstream 100 bases:

>100_bases
GGCCGCTCAGGCGTCCAGCCAGGTTTCCTGCAGATGGAGCCAGCGAATCCGGCCGTCGGCCGCGTCGCGTTCGAGCACGG
CGGTCGAGCGGCGCGCGCGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPTDDDTADSRTDSLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRRLRAVLNDPILVRGKSGMVPTEYGASLLE
AAQRALRDVDFIATPHGDFDPASSRRTFRLAAPDYLNDFFMPTLIARFREAAPLARLELDSLNPALDHAGALDSGALDLV
IANWPRPDPRFARSDLFPDTVVCLMRETHPLAHAPLTREAYAAAAHLAPTPYTGGARNAIEIGLARAKLERRVVTTLPYF
GVIPQVLLQSDLIFTTTRRFAEHYARMLPLVMLAPPVSFPRIRCYQLAHPQPDRPSDLAWLRALVKSVSDSLTTRPRARH
QAGR

Sequences:

>Translated_324_residues
MPTDDDTADSRTDSLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRRLRAVLNDPILVRGKSGMVPTEYGASLLE
AAQRALRDVDFIATPHGDFDPASSRRTFRLAAPDYLNDFFMPTLIARFREAAPLARLELDSLNPALDHAGALDSGALDLV
IANWPRPDPRFARSDLFPDTVVCLMRETHPLAHAPLTREAYAAAAHLAPTPYTGGARNAIEIGLARAKLERRVVTTLPYF
GVIPQVLLQSDLIFTTTRRFAEHYARMLPLVMLAPPVSFPRIRCYQLAHPQPDRPSDLAWLRALVKSVSDSLTTRPRARH
QAGR
>Mature_323_residues
PTDDDTADSRTDSLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRRLRAVLNDPILVRGKSGMVPTEYGASLLEA
AQRALRDVDFIATPHGDFDPASSRRTFRLAAPDYLNDFFMPTLIARFREAAPLARLELDSLNPALDHAGALDSGALDLVI
ANWPRPDPRFARSDLFPDTVVCLMRETHPLAHAPLTREAYAAAAHLAPTPYTGGARNAIEIGLARAKLERRVVTTLPYFG
VIPQVLLQSDLIFTTTRRFAEHYARMLPLVMLAPPVSFPRIRCYQLAHPQPDRPSDLAWLRALVKSVSDSLTTRPRARHQ
AGR

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=297, Percent_Identity=25.2525252525253, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081766, Length=267, Percent_Identity=24.3445692883895, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790147, Length=308, Percent_Identity=24.3506493506494, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36032; Mature: 35901

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDDDTADSRTDSLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRRLRAVLNDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ILVRGKSGMVPTEYGASLLEAAQRALRDVDFIATPHGDFDPASSRRTFRLAAPDYLNDFF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCHHHHHHH
MPTLIARFREAAPLARLELDSLNPALDHAGALDSGALDLVIANWPRPDPRFARSDLFPDT
HHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHH
VVCLMRETHPLAHAPLTREAYAAAAHLAPTPYTGGARNAIEIGLARAKLERRVVTTLPYF
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
GVIPQVLLQSDLIFTTTRRFAEHYARMLPLVMLAPPVSFPRIRCYQLAHPQPDRPSDLAW
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHH
LRALVKSVSDSLTTRPRARHQAGR
HHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
PTDDDTADSRTDSLDIWLVRVLRTLLLERSVTQAALRLNQTQPAISTALRRLRAVLNDP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ILVRGKSGMVPTEYGASLLEAAQRALRDVDFIATPHGDFDPASSRRTFRLAAPDYLNDFF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCHHHHHHH
MPTLIARFREAAPLARLELDSLNPALDHAGALDSGALDLVIANWPRPDPRFARSDLFPDT
HHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCHHH
VVCLMRETHPLAHAPLTREAYAAAAHLAPTPYTGGARNAIEIGLARAKLERRVVTTLPYF
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
GVIPQVLLQSDLIFTTTRRFAEHYARMLPLVMLAPPVSFPRIRCYQLAHPQPDRPSDLAW
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHH
LRALVKSVSDSLTTRPRARHQAGR
HHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]