| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yqjD [C]
Identifier: 238026353
GI number: 238026353
Start: 739469
End: 739771
Strand: Reverse
Name: yqjD [C]
Synonym: bglu_1g06870
Alternate gene names: 238026353
Gene position: 739771-739469 (Counterclockwise)
Preceding gene: 238026355
Following gene: 238026352
Centisome position: 18.94
GC content: 63.04
Gene sequence:
>303_bases ATGTCGGAAGTCAACAAGGAGAAACTGATGTCGGATATCAAAACCGTTCTCGCGGATGCGGAAGACCTGCTGAAACAAGC GGCGGCCACCACCGGCGACCGCGCCTCGGAGTTGCGCGAAAAGGCGCTGTCGCGCCTCAAGCAGGCCAAGGACAAGGCCG CCGACGTTCAGGTCGTGGTCGTGGAGAAAGGCAAGAAGGCGGTGCGCGCGACCGACGACTACGTCCACGAGCATCCGTGG ACCTCGATCGGCGTGGCGGCCGGCGTCGGCGTGCTGATCGGCCTGCTGATCAACCGCAAGTAA
Upstream 100 bases:
>100_bases TATGACTCGCCTGTGCAAGGTTTAGGCGCATGGCTCGCCAGCAGGCACGGGTTTCGCTAGGATGTGGTCTACGCGGTACC TCTGCACAAAGGGAGTTGCA
Downstream 100 bases:
>100_bases GCCCCACGGCGGCGCCCGCGAGCGGCGCCGCGCTCCGCTGCCGGGCCGGCCAGCGCCACCTGCGCCGGCCGGCCCGGCCA GTTCATGCACGCGCCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSEVNKEKLMSDIKTVLADAEDLLKQAAATTGDRASELREKALSRLKQAKDKAADVQVVVVEKGKKAVRATDDYVHEHPW TSIGVAAGVGVLIGLLINRK
Sequences:
>Translated_100_residues MSEVNKEKLMSDIKTVLADAEDLLKQAAATTGDRASELREKALSRLKQAKDKAADVQVVVVEKGKKAVRATDDYVHEHPW TSIGVAAGVGVLIGLLINRK >Mature_99_residues SEVNKEKLMSDIKTVLADAEDLLKQAAATTGDRASELREKALSRLKQAKDKAADVQVVVVEKGKKAVRATDDYVHEHPWT SIGVAAGVGVLIGLLINRK
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789485, Length=98, Percent_Identity=28.5714285714286, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10810; Mature: 10678
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVNKEKLMSDIKTVLADAEDLLKQAAATTGDRASELREKALSRLKQAKDKAADVQVVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE VEKGKKAVRATDDYVHEHPWTSIGVAAGVGVLIGLLINRK ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEVNKEKLMSDIKTVLADAEDLLKQAAATTGDRASELREKALSRLKQAKDKAADVQVVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE VEKGKKAVRATDDYVHEHPWTSIGVAAGVGVLIGLLINRK ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA