| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026348
Identifier: 238026348
GI number: 238026348
Start: 736306
End: 737112
Strand: Direct
Name: 238026348
Synonym: bglu_1g06820
Alternate gene names: NA
Gene position: 736306-737112 (Clockwise)
Preceding gene: 238026347
Following gene: 238026349
Centisome position: 18.85
GC content: 74.97
Gene sequence:
>807_bases ATGAGCAGGTGGCGGCGTCAGCGCGCGCACTCGCTGGTCGAGGCGCTCGTCGCCTTGGCGCTGGCGGCGGTCGTGCTGGC CGCCGCCGTGGCGCTGTACCGGACCCAGCGCGACGCCTATGTCGCGTCGGTCGATGCCGCGCGGGCGCGCGACGCGGCAG CGGTTGCGTTGACGCTCGTCGCGCAATCGGTGCGGATGGCGGGTTTCGTGCCGCTCGACATGCGCATGGCCGGCTTCGCC CCGCTATTCGGATGCGCGTCGGCGCGCGCGGCCGGCGACGCCATGCGGCCGGCCTGCGTCGCGGCGACCGACGGCTCCGA CGGTCTGCTGGTGCGCTACGTCGGCGACGTCCGGTCCACTTGGCCCACCGCAGACGGGCGCGTGACCGACTGCCTGGGGC AGGGCGTCGGCGCCGCGGGCGACCGGCCGCTGGTCGTCAACCGCTATTTCGTGCGGCAGGGCAGGTCGGCGGGCGTCCCC GAGCTGTATTGCGAGGGCAGCGGCCGGCCCGGGGTCGCACAGCCGCTCGTGGAGGGCATCGAACGGCTGCGCCTGCGTTA CCGTCTGCGGGGGCGGCCGGCATGGCGCGACGCCTCGGCGCTGGCGGCCGACGCGTGGCGCGAGGTGGTCGCGATCGAGG TCTGCGTGCAGGTGCGAGGCACGGCGCCGGCACCGGCCGGGCGCTACATCGACTGCGATGGCATCTCGCAAACGAGCCGC GACGGGCGGCGCCGCTGGATCGCGCGGCGCTGGCTGTCGCTGCGAAACACCGTTGCGCCGGTGGGCGCAACGGGAGCGAA CCAATGA
Upstream 100 bases:
>100_bases GCGGCCACGGTGCCGCGCCGGCTGTCTGCAAGCCGCGCGTGAGCGGCACGCGCCAGCCGGCCGGCTGCGTGGCGCTCGCC TATGCGGCGGAGCTGTCGCC
Downstream 100 bases:
>100_bases ATCGGACGGATGGTGCGCAGCCCTCGCCGCGCCCGGGCCATGCAGTGCCGTGCGCGTATCCGCGCGCGGCCGACGGGTCC AGGCGTCGGCGCCGCGCGGC
Product: prepilin-type cleavage/methylation-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSRWRRQRAHSLVEALVALALAAVVLAAAVALYRTQRDAYVASVDAARARDAAAVALTLVAQSVRMAGFVPLDMRMAGFA PLFGCASARAAGDAMRPACVAATDGSDGLLVRYVGDVRSTWPTADGRVTDCLGQGVGAAGDRPLVVNRYFVRQGRSAGVP ELYCEGSGRPGVAQPLVEGIERLRLRYRLRGRPAWRDASALAADAWREVVAIEVCVQVRGTAPAPAGRYIDCDGISQTSR DGRRRWIARRWLSLRNTVAPVGATGANQ
Sequences:
>Translated_268_residues MSRWRRQRAHSLVEALVALALAAVVLAAAVALYRTQRDAYVASVDAARARDAAAVALTLVAQSVRMAGFVPLDMRMAGFA PLFGCASARAAGDAMRPACVAATDGSDGLLVRYVGDVRSTWPTADGRVTDCLGQGVGAAGDRPLVVNRYFVRQGRSAGVP ELYCEGSGRPGVAQPLVEGIERLRLRYRLRGRPAWRDASALAADAWREVVAIEVCVQVRGTAPAPAGRYIDCDGISQTSR DGRRRWIARRWLSLRNTVAPVGATGANQ >Mature_267_residues SRWRRQRAHSLVEALVALALAAVVLAAAVALYRTQRDAYVASVDAARARDAAAVALTLVAQSVRMAGFVPLDMRMAGFAP LFGCASARAAGDAMRPACVAATDGSDGLLVRYVGDVRSTWPTADGRVTDCLGQGVGAAGDRPLVVNRYFVRQGRSAGVPE LYCEGSGRPGVAQPLVEGIERLRLRYRLRGRPAWRDASALAADAWREVVAIEVCVQVRGTAPAPAGRYIDCDGISQTSRD GRRRWIARRWLSLRNTVAPVGATGANQ
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28485
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWRRQRAHSLVEALVALALAAVVLAAAVALYRTQRDAYVASVDAARARDAAAVALTLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AQSVRMAGFVPLDMRMAGFAPLFGCASARAAGDAMRPACVAATDGSDGLLVRYVGDVRST HHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECHHHHC WPTADGRVTDCLGQGVGAAGDRPLVVNRYFVRQGRSAGVPELYCEGSGRPGVAQPLVEGI CCCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH ERLRLRYRLRGRPAWRDASALAADAWREVVAIEVCVQVRGTAPAPAGRYIDCDGISQTSR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHH DGRRRWIARRWLSLRNTVAPVGATGANQ HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRWRRQRAHSLVEALVALALAAVVLAAAVALYRTQRDAYVASVDAARARDAAAVALTLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AQSVRMAGFVPLDMRMAGFAPLFGCASARAAGDAMRPACVAATDGSDGLLVRYVGDVRST HHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECHHHHC WPTADGRVTDCLGQGVGAAGDRPLVVNRYFVRQGRSAGVPELYCEGSGRPGVAQPLVEGI CCCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH ERLRLRYRLRGRPAWRDASALAADAWREVVAIEVCVQVRGTAPAPAGRYIDCDGISQTSR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHH DGRRRWIARRWLSLRNTVAPVGATGANQ HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA