| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dgk [H]
Identifier: 238026304
GI number: 238026304
Start: 680466
End: 681149
Strand: Reverse
Name: dgk [H]
Synonym: bglu_1g06380
Alternate gene names: 238026304
Gene position: 681149-680466 (Counterclockwise)
Preceding gene: 238026305
Following gene: 238026303
Centisome position: 17.44
GC content: 70.18
Gene sequence:
>684_bases ATGAACGCGACGCCGCTGACCGTCACGCCGCCCGACCCGCGCCCGCCCCACCGCTACCTCGCGATCGAGGGGCCGATCGG CGTCGGCAAGACCTCGCTAGCCACGCTGCTGGCCGAGCGCTGGGGCATGGACACGCTCTTCGAACGCCCGCAGGACAATC CGTTTCTCGAACGCTTCTACCGCGAGGGCGCACGCTACGCGCTGCCGGCGCAGCTCGCGTTCGCGCTGCAGCGCGCGCGC CAGACCGGCGGGATCGCCGCCGCGCAGGCCGCCGGCGCCGCGCTGGTGGCCGATTTCATGCCGCAGAAGAGCGAGATCTT CGCGCGCCTGACGCTCGCCGACGACGAATGGCAGCTCTACCGCACGCTGGCCGAGCGCATCGACGCGCCCGCGCCCGCGC CCGACCTGGTGGTCTACCTGCAGGCGAGCCCCGAGGTGCTGTACGCGCGGATCCAGAAACGCGGCATCGCAGCGGAACTG CAGATCGGCGACGCCTACCTGCGCGCGCTGTGCGACGCCTACAACGAATTCTTCTATCACTACGACCGCACGCCGGTCCT CACCGTCGCGGCGGAACACCTGAATCCGCTCGACTCGCCGGACGATCTTGCCTTGCTGATGACGCGCATCGAGACGATGC GCGGGCGCAAGGAATCCTTCGTCAAGGGCGGCGTCGGCCGCTGA
Upstream 100 bases:
>100_bases AGGCGTTCCTCGCCGCGGTGGCCGACCAGCGCATCGAGAAGGTGCAGACCTGCCAGTGCCTGCTGGCGATGAAGAGCGCG AACGAGTCGCGCCGCTGCCG
Downstream 100 bases:
>100_bases GGCGGTTCGCGGCGCCGCCTGTTTTCTCCACGAAACCGGACCCCCCATGACCTACCTCCAGGAATCGAGCCGCGCGGCCG TGACCGTGCCGAAACTGCAG
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNATPLTVTPPDPRPPHRYLAIEGPIGVGKTSLATLLAERWGMDTLFERPQDNPFLERFYREGARYALPAQLAFALQRAR QTGGIAAAQAAGAALVADFMPQKSEIFARLTLADDEWQLYRTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAEL QIGDAYLRALCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLMTRIETMRGRKESFVKGGVGR
Sequences:
>Translated_227_residues MNATPLTVTPPDPRPPHRYLAIEGPIGVGKTSLATLLAERWGMDTLFERPQDNPFLERFYREGARYALPAQLAFALQRAR QTGGIAAAQAAGAALVADFMPQKSEIFARLTLADDEWQLYRTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAEL QIGDAYLRALCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLMTRIETMRGRKESFVKGGVGR >Mature_227_residues MNATPLTVTPPDPRPPHRYLAIEGPIGVGKTSLATLLAERWGMDTLFERPQDNPFLERFYREGARYALPAQLAFALQRAR QTGGIAAAQAAGAALVADFMPQKSEIFARLTLADDEWQLYRTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAEL QIGDAYLRALCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLMTRIETMRGRKESFVKGGVGR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 25217; Mature: 25217
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATPLTVTPPDPRPPHRYLAIEGPIGVGKTSLATLLAERWGMDTLFERPQDNPFLERFY CCCCCCEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHH REGARYALPAQLAFALQRARQTGGIAAAQAAGAALVADFMPQKSEIFARLTLADDEWQLY HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHH RTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAELQIGDAYLRALCDAYNEFFYH HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH YDRTPVLTVAAEHLNPLDSPDDLALLMTRIETMRGRKESFVKGGVGR CCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCC >Mature Secondary Structure MNATPLTVTPPDPRPPHRYLAIEGPIGVGKTSLATLLAERWGMDTLFERPQDNPFLERFY CCCCCCEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHH REGARYALPAQLAFALQRARQTGGIAAAQAAGAALVADFMPQKSEIFARLTLADDEWQLY HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHH RTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAELQIGDAYLRALCDAYNEFFYH HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH YDRTPVLTVAAEHLNPLDSPDDLALLMTRIETMRGRKESFVKGGVGR CCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]