| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hemH [H]
Identifier: 238026296
GI number: 238026296
Start: 671398
End: 672465
Strand: Direct
Name: hemH [H]
Synonym: bglu_1g06300
Alternate gene names: 238026296
Gene position: 671398-672465 (Clockwise)
Preceding gene: 238026295
Following gene: 238026297
Centisome position: 17.19
GC content: 70.51
Gene sequence:
>1068_bases ATGCGTTTTGATCTCGAACCACCGTCGCAACACGCCGCGGCGCATCGCGTCGCCGTCCTGCTCGTCAATCTCGGTACGCC CGACGCGCCCACTCCGGGCGCGGTGCGGCGCTACCTCGCGCAGTTCCTGTCGGACCCGCGCGTGGTCGAAATCCCGGCCA TCGCCTGGCAGCCGATCCTGCGCGGGCTGATCCTGCCGCTGCGTTCGCGCGCCTCGGCGAAGAAATACCGGTCGGTGTGG ATGCCCGAGGGCTCGCCGCTGCGCGTGTATACCGAACGGCAGGTCGAGGGCCTGCGCCCGCTGTTCGCCGCGAACGGCTA CCAGGTGCTGATCGACTACGCGATGCGCTACGGCACGCCCGACATCGGCACGGTGCTCGGCCAGCTGAAGCGCGCCGGCA CCGAGCGCGTGTTGCTGGTGCCGATGTATCCGCAGTACTCGTCGTCGACCACGGCCACCGCGTTCGACGCTGCGTTCGCC GCGCTCGGCCGCATGCGCAACCAGCTCGAGGTCCGCACGCTGCGCCACTACGCCGATCATCCCGCCTACATCCACGCGCT CGCCGAGCAGGTCCGCCAATACTGGGCCGAGCACGGGCGCCCCGATTTCGCGGCCGGCGACAAGCTGGTGCTGAGCTTCC ACGGCGTGCCCAAGCGCACGCTCGACCTCGGCGACCCCTATCATGACCAGTGCCAGCAGACGGGCGCGTTGCTGATGGCC GCACTCGAACTGACCCCGCTCGAATGCCGCGTCACGTTCCAGTCGCGCTTCGGCAAGGCCGAATGGCTGCAGCCCTACAC GGCGCCGACGCTGCGCGAGCTCGGCGCGGCCGGCGTCAGGCGCGCCGACGTGTTCTGCCCGGGCTTCACGGCCGACTGCC TCGAAACGATCGAGGAGATCGGCATGGAGGTGCGCGACGAGTTTCTGCACGGCGGCGGCGGGACGTTCCACCGGATTCCG TGCCTGAACGCGTCGCCGGCCTGGATCGACGCGCTCGGCCAGATCGTGGCCGAGAACCTGCAGGGCTGGCCGGTGCGCGC GCCGGCGCCGGCCGACGCGGCGGCATGA
Upstream 100 bases:
>100_bases GATACGTGCGCCGGAGGCATTGGGGCGGCATCGGTCGCGCCGCGGCGGCCTCGCTATAATGAGGCTCGTTCGATCCGGTG CCCAGGCCCACCTTCCGTTC
Downstream 100 bases:
>100_bases CGGCGAACCGGCCGCGCGACGGCCACTGAGACGGGAAAGATCCGATGAATCACCGAATTTCGACCGAACCGGGCGCGAAG CTGCGCATCGACAAATGGCT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRFDLEPPSQHAAAHRVAVLLVNLGTPDAPTPGAVRRYLAQFLSDPRVVEIPAIAWQPILRGLILPLRSRASAKKYRSVW MPEGSPLRVYTERQVEGLRPLFAANGYQVLIDYAMRYGTPDIGTVLGQLKRAGTERVLLVPMYPQYSSSTTATAFDAAFA ALGRMRNQLEVRTLRHYADHPAYIHALAEQVRQYWAEHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALELTPLECRVTFQSRFGKAEWLQPYTAPTLRELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHGGGGTFHRIP CLNASPAWIDALGQIVAENLQGWPVRAPAPADAAA
Sequences:
>Translated_355_residues MRFDLEPPSQHAAAHRVAVLLVNLGTPDAPTPGAVRRYLAQFLSDPRVVEIPAIAWQPILRGLILPLRSRASAKKYRSVW MPEGSPLRVYTERQVEGLRPLFAANGYQVLIDYAMRYGTPDIGTVLGQLKRAGTERVLLVPMYPQYSSSTTATAFDAAFA ALGRMRNQLEVRTLRHYADHPAYIHALAEQVRQYWAEHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALELTPLECRVTFQSRFGKAEWLQPYTAPTLRELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHGGGGTFHRIP CLNASPAWIDALGQIVAENLQGWPVRAPAPADAAA >Mature_355_residues MRFDLEPPSQHAAAHRVAVLLVNLGTPDAPTPGAVRRYLAQFLSDPRVVEIPAIAWQPILRGLILPLRSRASAKKYRSVW MPEGSPLRVYTERQVEGLRPLFAANGYQVLIDYAMRYGTPDIGTVLGQLKRAGTERVLLVPMYPQYSSSTTATAFDAAFA ALGRMRNQLEVRTLRHYADHPAYIHALAEQVRQYWAEHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALELTPLECRVTFQSRFGKAEWLQPYTAPTLRELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHGGGGTFHRIP CLNASPAWIDALGQIVAENLQGWPVRAPAPADAAA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=338, Percent_Identity=25.4437869822485, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI60499025, Length=338, Percent_Identity=25.4437869822485, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=45.3416149068323, Blast_Score=275, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6324750, Length=336, Percent_Identity=24.1071428571429, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=24.9266862170088, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24651774, Length=269, Percent_Identity=24.5353159851301, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39206; Mature: 39206
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDLEPPSQHAAAHRVAVLLVNLGTPDAPTPGAVRRYLAQFLSDPRVVEIPAIAWQPIL CCCCCCCCHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHH RGLILPLRSRASAKKYRSVWMPEGSPLRVYTERQVEGLRPLFAANGYQVLIDYAMRYGTP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCHHHHCCCHHHHHHHHHHCCCC DIGTVLGQLKRAGTERVLLVPMYPQYSSSTTATAFDAAFAALGRMRNQLEVRTLRHYADH HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAYIHALAEQVRQYWAEHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALELTPLECRVTFQSRFGKAEWLQPYTAPTLRELGAAGVRRADVFCPGFTADCLETIEEI HHHCCCCEEEEEHHHHCCCHHHCCCCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHGGGGTFHRIPCLNASPAWIDALGQIVAENLQGWPVRAPAPADAAA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFDLEPPSQHAAAHRVAVLLVNLGTPDAPTPGAVRRYLAQFLSDPRVVEIPAIAWQPIL CCCCCCCCHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHH RGLILPLRSRASAKKYRSVWMPEGSPLRVYTERQVEGLRPLFAANGYQVLIDYAMRYGTP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCHHHHCCCHHHHHHHHHHCCCC DIGTVLGQLKRAGTERVLLVPMYPQYSSSTTATAFDAAFAALGRMRNQLEVRTLRHYADH HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAYIHALAEQVRQYWAEHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALELTPLECRVTFQSRFGKAEWLQPYTAPTLRELGAAGVRRADVFCPGFTADCLETIEEI HHHCCCCEEEEEHHHHCCCHHHCCCCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHGGGGTFHRIPCLNASPAWIDALGQIVAENLQGWPVRAPAPADAAA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA