The gene/protein map for NC_011729 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026260

Identifier: 238026260

GI number: 238026260

Start: 623236

End: 623865

Strand: Reverse

Name: 238026260

Synonym: bglu_1g05930

Alternate gene names: NA

Gene position: 623865-623236 (Counterclockwise)

Preceding gene: 238026261

Following gene: 238026256

Centisome position: 15.97

GC content: 74.29

Gene sequence:

>630_bases
CTGGCCACCGCGCAGCAGCTGGCCGAATGGCTGTCGGTATCGCCGCGCACGGTCTATCGCGACGTCCGCGACCTGCAGCT
GTCGGGCGTGCCGATCGAGGGCGAGGCGGGGATCGGCTACCGCCTGAACCGCGCCGCGCACCTGCCGCCGCTGACCTTCA
CCAGCGAGGAGCTGGCGGCGCTCGCGGCCGGCGCGCGCATGCTCGAATCGTGGGGCGGCGCGACCCTGGCGGGCGGGGCA
CGCTCGGCGCTCGCCAAGATCGCCTCGGCGATGCCGGCCGACAAGCGCGTCGCGCTCGACCGCCTGCCCCTGTTCGCGCC
GTCGATCCACGTGGACGCGGCGTTCCGCGAGGCCGTCGACGCGCTTCAGCTGGCCATCGACGGCCGGCGCGTCGTGCGCC
TTTCCTATCGCGACAAGCGGGATGCGCCGAGCGAGCGGCGCGTCTGGCCGCTCGGCATGGCGTACTGGGGCGGGCAGTGG
ACGGTGGCCGCCTGGTGCGAGCTGCGCGGCGCGTTCCGCAATTTCGACCTCGCGCGGATGCGCGGCATCGTGGCCTGCGA
GGTCTATCCCGACGTCGCGGGGCGCCGGCTCGCCGATTTCCTGCGCACCGTGGAGCGCGGCAGCCACTGA

Upstream 100 bases:

>100_bases
CGCACGGCAGCACGCCGGGCACGGCCGGCGCGCTCGTCTACCTGAACGCGCACGCATCGGTGTCGGCCGCGCTCGAACGC
GCGCGGCGCGCGGGCGGCGC

Downstream 100 bases:

>100_bases
GCGGCGCGCGCGGCGCTATTCGACCGCCTTCACCATGTCCTCGACCACCTTCTTGGCGTCGCCGAACACCATCATGGTCT
TGTCCATGTAGAACAGCTCG

Product: Helix-turn-helix, type 11 domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Transcription Regulator Protein; HTH Type; Regulatory Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; Deor Family Transcriptional Regulator; HTH Domain Protein; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; Regulatory Protein Deor; LOW QUALITY PROTEIN Helix-Turn-Helix Type

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MATAQQLAEWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAAHLPPLTFTSEELAALAAGARMLESWGGATLAGGA
RSALAKIASAMPADKRVALDRLPLFAPSIHVDAAFREAVDALQLAIDGRRVVRLSYRDKRDAPSERRVWPLGMAYWGGQW
TVAAWCELRGAFRNFDLARMRGIVACEVYPDVAGRRLADFLRTVERGSH

Sequences:

>Translated_209_residues
MATAQQLAEWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAAHLPPLTFTSEELAALAAGARMLESWGGATLAGGA
RSALAKIASAMPADKRVALDRLPLFAPSIHVDAAFREAVDALQLAIDGRRVVRLSYRDKRDAPSERRVWPLGMAYWGGQW
TVAAWCELRGAFRNFDLARMRGIVACEVYPDVAGRRLADFLRTVERGSH
>Mature_208_residues
ATAQQLAEWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAAHLPPLTFTSEELAALAAGARMLESWGGATLAGGAR
SALAKIASAMPADKRVALDRLPLFAPSIHVDAAFREAVDALQLAIDGRRVVRLSYRDKRDAPSERRVWPLGMAYWGGQWT
VAAWCELRGAFRNFDLARMRGIVACEVYPDVAGRRLADFLRTVERGSH

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22931; Mature: 22799

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAQQLAEWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAAHLPPLTFTSEELAA
CCCHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHH
LAAGARMLESWGGATLAGGARSALAKIASAMPADKRVALDRLPLFAPSIHVDAAFREAVD
HHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
ALQLAIDGRRVVRLSYRDKRDAPSERRVWPLGMAYWGGQWTVAAWCELRGAFRNFDLARM
HHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHCCCHHHH
RGIVACEVYPDVAGRRLADFLRTVERGSH
CCEEEEEECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATAQQLAEWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAAHLPPLTFTSEELAA
CCHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHH
LAAGARMLESWGGATLAGGARSALAKIASAMPADKRVALDRLPLFAPSIHVDAAFREAVD
HHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
ALQLAIDGRRVVRLSYRDKRDAPSERRVWPLGMAYWGGQWTVAAWCELRGAFRNFDLARM
HHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHCCCHHHH
RGIVACEVYPDVAGRRLADFLRTVERGSH
CCEEEEEECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA