| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pntAA [H]
Identifier: 238026257
GI number: 238026257
Start: 620282
End: 621427
Strand: Direct
Name: pntAA [H]
Synonym: bglu_1g05900
Alternate gene names: 238026257
Gene position: 620282-621427 (Clockwise)
Preceding gene: 238026253
Following gene: 238026258
Centisome position: 15.88
GC content: 74.43
Gene sequence:
>1146_bases ATGCTGATCGGAGTGCCCGCCGAGACGAGGGCGAACGAGGCGCGCGTTGCCGCGACGCCGGAAACCATCAAGAAATACGT GGCGGCCGGCCACGCCGTGACGGTCGAACGCGGCGCCGGCGCCGCCGCCAGTTACCCCGACGAGGCCTATGCCGCGGCCG GGGCGACGCTCGGCGAGCGCGCGGCCGCGTTCGGTGCCGAGATCGTGCTGAAGGTGCAGGCGCCGGAGCCGGCCGAGCTG CCGCTGCTCAAGCGCGGCGCCGTGCTGGTCGGCATGCTCGAGCCGTTCGACGCCGCCCAGGCCCAGCGGCTCGCGGCGGC CGGCGTGACGGGCTTCGCGCTCGAGGCCGCGCCGCGCACCACGCGCGCGCAGAGCCTCGACGTGCTGTCCTCGCAGGCCA ACATCGCCGGCTACAGGGCGGTGCTGGTGGCGGCCTCGCTCTACCCGCGCTTCCTGCCGATGCTGATGACCGCCGCAGGC ACCGTCAAGGCCGCCCGCGTGCTGGTGCTGGGCGCTGGCGTGGCGGGGCTGCAGGCGATCGCCACCGCCAAGCGGCTGGG CGCCGTGATCGAGGCGTCCGACGTGCGGCCGGCCGTGAAGGAGCAGATCGAATCGCTCGGCGCGAAGTTCCTCGACGTGC CGTTCGAGACCGACGAGGAGCGCGAGGCCGCGCAGGGCACCGGCGGCTACGCGCGGCCGATGCCGCCTTCATGGCTGGCG CGCCAGGCCGCGCTCGTGCACGAGCGCGCCAAGCAGGCCGACATCGTGATCACCACCGCGCTGATTCCGGGGCGCCCGGC GCCCACGCTGATCGCTGCCGAGACGGTGGCGGCCATGAAGCCGGGCGCGGTGCTGGTCGATCTGGCCGCCGGCCGCGGCG CCGAGGTGGACGGCACCGGCCGGCGCGGCGGCAACTGCCCGCTCACCGTCGCCGACCAGGTGGTGGTCGCGCACGGCGTG ACGATCGCCGGCCACACCAATCTCGCCGCCCAGGTGCCGGCCGACGCCTCGGCGCTCTACGCGCGCAATCTGGCCGACTT CCTGAAGCTCATCATCGGCCCGGACGGCGCGCTGCGGATCGACCCGGCCGACGACATCGTCGCCGCGACGCTGCTCTGCC GCGACGGCGAAGTGCTGCGCAAATAA
Upstream 100 bases:
>100_bases TTGGCGCGTGGAACACGCCGTTGCTTTCGGGCCGGTTGCCGCTTTCCGGCTCGCCATCACAATCGAAATCAATAACAGAG CGCAAGCTGGAGGGATCACG
Downstream 100 bases:
>100_bases TCGAGGAGACCCATGGAAATCATCAATCACACCGTGATCAACGTGATCATCTTCGTGCTGGCCGTCTACGTCGGCTACCA CGTGGTCTGGAACGTCACCC
Product: Alanine dehydrogenase/PNT domain-containing protein
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLIGVPAETRANEARVAATPETIKKYVAAGHAVTVERGAGAAASYPDEAYAAAGATLGERAAAFGAEIVLKVQAPEPAEL PLLKRGAVLVGMLEPFDAAQAQRLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYRAVLVAASLYPRFLPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGTGGYARPMPPSWLA RQAALVHERAKQADIVITTALIPGRPAPTLIAAETVAAMKPGAVLVDLAAGRGAEVDGTGRRGGNCPLTVADQVVVAHGV TIAGHTNLAAQVPADASALYARNLADFLKLIIGPDGALRIDPADDIVAATLLCRDGEVLRK
Sequences:
>Translated_381_residues MLIGVPAETRANEARVAATPETIKKYVAAGHAVTVERGAGAAASYPDEAYAAAGATLGERAAAFGAEIVLKVQAPEPAEL PLLKRGAVLVGMLEPFDAAQAQRLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYRAVLVAASLYPRFLPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGTGGYARPMPPSWLA RQAALVHERAKQADIVITTALIPGRPAPTLIAAETVAAMKPGAVLVDLAAGRGAEVDGTGRRGGNCPLTVADQVVVAHGV TIAGHTNLAAQVPADASALYARNLADFLKLIIGPDGALRIDPADDIVAATLLCRDGEVLRK >Mature_381_residues MLIGVPAETRANEARVAATPETIKKYVAAGHAVTVERGAGAAASYPDEAYAAAGATLGERAAAFGAEIVLKVQAPEPAEL PLLKRGAVLVGMLEPFDAAQAQRLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYRAVLVAASLYPRFLPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGTGGYARPMPPSWLA RQAALVHERAKQADIVITTALIPGRPAPTLIAAETVAAMKPGAVLVDLAAGRGAEVDGTGRRGGNCPLTVADQVVVAHGV TIAGHTNLAAQVPADASALYARNLADFLKLIIGPDGALRIDPADDIVAATLLCRDGEVLRK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=394, Percent_Identity=36.5482233502538, Blast_Score=235, Evalue=4e-62, Organism=Homo sapiens, GI122939153, Length=394, Percent_Identity=36.5482233502538, Blast_Score=235, Evalue=4e-62, Organism=Escherichia coli, GI1787887, Length=381, Percent_Identity=44.0944881889764, Blast_Score=298, Evalue=4e-82, Organism=Caenorhabditis elegans, GI17550456, Length=377, Percent_Identity=41.6445623342175, Blast_Score=278, Evalue=4e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 38999; Mature: 38999
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGVPAETRANEARVAATPETIKKYVAAGHAVTVERGAGAAASYPDEAYAAAGATLGER CEECCCCCCCCCCCEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCHHHHH AAAFGAEIVLKVQAPEPAELPLLKRGAVLVGMLEPFDAAQAQRLAAAGVTGFALEAAPRT HHHCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCC TRAQSLDVLSSQANIAGYRAVLVAASLYPRFLPMLMTAAGTVKAARVLVLGAGVAGLQAI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGTGGYARPMPPSWLA HHHHHHHHEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHH RQAALVHERAKQADIVITTALIPGRPAPTLIAAETVAAMKPGAVLVDLAAGRGAEVDGTG HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCCCCC RRGGNCPLTVADQVVVAHGVTIAGHTNLAAQVPADASALYARNLADFLKLIIGPDGALRI CCCCCCCEEHHCCEEECCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEE DPADDIVAATLLCRDGEVLRK CCCHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MLIGVPAETRANEARVAATPETIKKYVAAGHAVTVERGAGAAASYPDEAYAAAGATLGER CEECCCCCCCCCCCEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCHHHHH AAAFGAEIVLKVQAPEPAELPLLKRGAVLVGMLEPFDAAQAQRLAAAGVTGFALEAAPRT HHHCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCC TRAQSLDVLSSQANIAGYRAVLVAASLYPRFLPMLMTAAGTVKAARVLVLGAGVAGLQAI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGTGGYARPMPPSWLA HHHHHHHHEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCCCCCCCHHHHH RQAALVHERAKQADIVITTALIPGRPAPTLIAAETVAAMKPGAVLVDLAAGRGAEVDGTG HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCCCCC RRGGNCPLTVADQVVVAHGVTIAGHTNLAAQVPADASALYARNLADFLKLIIGPDGALRI CCCCCCCEEHHCCEEECCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEE DPADDIVAATLLCRDGEVLRK CCCHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]